Commits for kate

v389_preview2 to v389_base (2019-10-07 to 2019-10-14) v389

0440cfd6ef79932ae3d3d1934d9665b2848e8952 Mon Oct 7 14:54:50 2019 -0700

• Add filter activated notice to bigNarrowPeak. refs #24271
  • src/hg/hgTracks/bedTrack.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgTracks/bigBedTrack.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgTracks/encode.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 1, context: html, text, full: html, text
  • src/hg/inc/hui.h - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 4, context: html, text, full: html, text

51d89ce7eda1b4b3a8669379230be74ec76e8150 Mon Oct 7 15:00:54 2019 -0700

• Fixes and flexibility for other track types, new filtering. refs #23365
  • src/hg/hgTracks/bedTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/bigBedTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/inc/hui.h - lines changed 8, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 19, context: html, text, full: html, text

d88101b2f5f3804786bcd15ee7e75fb8270bdc32 Tue Oct 8 11:09:51 2019 -0700

• gnomAD variants track for hg38. Quick track load for SAB. refs #21782
  • src/hg/makeDb/doc/hg38/gnomad.txt - lines changed 52, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 30, context: html, text, full: html, text

898e87ad94321521bcf2330139673df6bfe1cfe5 Tue Oct 8 11:11:16 2019 -0700

• Merge
  • src/hg/makeDb/trackDb/human/hg38/gnomad.html - lines changed 54, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 32, context: html, text, full: html, text

c9e2acd282cda244daf6e9ecb4feaea2b1994df7 Tue Oct 8 11:25:31 2019 -0700

• Adding download times to build doc. refs #21782
  • src/hg/makeDb/doc/hg38/gnomad.txt - lines changed 9, context: html, text, full: html, text

6d5b5b9941f013a6cd0e8d7cb4d0df70b3f38e2c Tue Oct 8 11:31:28 2019 -0700

• Adding class new to new settings (forgot bout that).
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v2.html - lines changed 3, context: html, text, full: html, text

dc3d5f6897654577d4349c40f62ef8f139f2117a Tue Oct 8 13:09:25 2019 -0700

• Add info and pennantIcon about lift, as per AH suggestion. refs #21782
  • src/hg/makeDb/trackDb/human/hg38/gnomad.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 1, context: html, text, full: html, text

ff9f567866c9c0e9e429e010fcdde9b6af5ea92e Mon Oct 14 10:07:49 2019 -0700

• Add collapsible panel for details of individual interactions in a cluster. Requested by QA. refs #24037
  • src/hg/hgc/interactClick.c - lines changed 12, context: html, text, full: html, text