Commits for lrnassar

v398_base to v399_preview (2020-05-11 to 2020-05-18) v399

9be83456f0cc46e79ebc460d75fe61ab9198c0c0 Tue May 12 11:00:18 2020 -0700

• Adding new util for indexing bigBeds, adding make tests and to list of user utilts refs #24479
  • src/utils/makefile - lines changed 1, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/makefile - lines changed 11, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/tests/expected/uniformDnase.multiBed.bb - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/expected/uniformDnase.multiBedSources.tab - lines changed 3, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/tests/in/hg19.chrom.sizes - lines changed 93, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/tests/in/trackDb.smallExample.txt - lines changed 127, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/tests/in/wgEncodeOpenChromDnaseGm12878Aln_5Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeOpenChromDnaseH1hescAln_2Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeOpenChromDnaseK562Aln_2Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUWDukeDnaseGM12878.fdr01peaks.hg19.bb - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUWDukeDnaseH1hESC.fdr01peaks.hg19.bb - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUWDukeDnaseK562.fdr01peaks.hg19.bb - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUwDnaseGm12878Aln_2Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUwDnaseH1hescAln_1Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/in/wgEncodeUwDnaseK562Aln_2Reps.norm5.rawsignal.bw - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/utils/trackDbIndexBb/tests/makefile - lines changed 16, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/tests/trackDbIndexBb - lines changed 267, context: html, text, full: html, text
  • src/utils/trackDbIndexBb/trackDbIndexBb - lines changed 267, context: html, text, full: html, text