File Changes for markd

v403_preview2 to v403_base (2020-08-17 to 2020-08-24) v403

• src/hg/inc/genePred.h
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    838bd75e5d5b859f5b81102933273b7c7e7e2114 Sun Aug 16 10:29:38 2020 -0700
    removed redundent function
  • lines changed 1, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/lib/genePred.c
  • lines changed 13, context: html, text, full: html, text
    838bd75e5d5b859f5b81102933273b7c7e7e2114 Sun Aug 16 10:29:38 2020 -0700
    removed redundent function
• src/hg/utils/transMapPslToGenePred/makefile
  • lines changed 3, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/README
  • lines changed 10, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/cds2InsertTest.fs.tsv
  • lines changed 3, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/codingFillTest.fs.tsv
  • lines changed 48, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/fill30Test.fs.tsv
  • lines changed 48, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/fillTest.fs.tsv
  • lines changed 49, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/musTest.fs.tsv
  • lines changed 50, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/nonCodingFillTest.fs.tsv
  • lines changed 50, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/tmAstMex1NoMergeTests.fs.tsv
  • lines changed 41, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/expected/tmAstMex1NoMergeTests.mapped.gp
  • lines changed 7, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/input/tm-astMex1-hg38.ensembl.psl
  • lines changed 7, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/input/tm-astMex1.ensembl.gp
  • lines changed 7, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/tests/makefile
  • lines changed 24, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT
• src/hg/utils/transMapPslToGenePred/transMapPslToGenePred.c
  • lines changed 228, context: html, text, full: html, text
    e6cd18ccbe6e255de8cb54bc70da0e42fe9a73b5 Mon Aug 17 19:17:10 2020 -0700
    add report of location of frameshifts for use by CAT