File Changes for hiram

v403_base to v404_preview (2020-08-24 to 2020-08-31) v404

• src/hg/lib/customFactory.c
  • lines changed 21, context: html, text, full: html, text
    02882e0cda463b6bee5f2061eb89b26a437e42e0 Mon Aug 24 12:26:49 2020 -0700
    allow genbank/refseq/ensembl chrom names from chromAlias table for input on bed file custom tracks refs #24396
  • lines changed 1, context: html, text, full: html, text
    57e99ec5381cc522b025ff1259bd27059cc8c19a Tue Aug 25 07:45:19 2020 -0700
    remove debug print statement refs #24396
• src/hg/utils/automation/HgAutomate.pm
  • lines changed 3, context: html, text, full: html, text
    19f3bd6bd473e6b5cb3835199c385e7c82329188 Tue Aug 25 12:50:32 2020 -0700
    the -priority option needs to be defined properly for the help message no redmine
• src/hg/utils/automation/chromAliasBedTest.pl
  • lines changed 66, context: html, text, full: html, text
    324671bac877d29cafa50dbc8e944c8c554581aa Mon Aug 24 15:04:28 2020 -0700
    output bed file with every possible name in a database genome refs #24396
  • lines changed 1, context: html, text, full: html, text
    33b5cb286a820d589a23e013a66f8c401c3682bd Tue Aug 25 16:44:36 2020 -0700
    better naming of the alias elements to see their names in the track refs #24396
  • lines changed 5, context: html, text, full: html, text
    3f67e4d0d91bb2f319c9ae26d9dff4eb47990d61 Wed Aug 26 09:14:38 2020 -0700
    must limit name length to under 255 refs #24396
• src/hg/utils/automation/doAssemblyHub.pl
  • lines changed 30, context: html, text, full: html, text
    653eaa635409806f4885b0486125efd4390c0931 Thu Aug 27 14:00:07 2020 -0700
    fix scripts to behave properly when not using UCSC sequence names refs #23734
• src/hg/utils/automation/doNcbiRefSeq.pl
  • lines changed 114, context: html, text, full: html, text
    653eaa635409806f4885b0486125efd4390c0931 Thu Aug 27 14:00:07 2020 -0700
    fix scripts to behave properly when not using UCSC sequence names refs #23734
• src/hg/utils/automation/ncbiRefSeqOtherAttrs.pl
  • lines changed 1, context: html, text, full: html, text
    653eaa635409806f4885b0486125efd4390c0931 Thu Aug 27 14:00:07 2020 -0700
    fix scripts to behave properly when not using UCSC sequence names refs #23734