Commits for max

v409_preview2 to v409_base (2021-01-11 to 2021-01-18) v409

d4a8262db6dfa1e7fe92f2975298529d152bbd95 Mon Jan 11 14:11:01 2021 -0800

• no more urlencoded letters in the right click menu, refs #26687
  • src/hg/js/hgTracks.js - lines changed 1, context: html, text, full: html, text

b32f0ef8402a62095e6db085ee27ef933af441dc Tue Jan 12 03:22:40 2021 -0800

• changes after code review to fix utf8 output from pandoc for our latin1 old school webserver. refs #26789
  • src/hg/htdocs/inc/gbPageStart.html - lines changed 4, context: html, text, full: html, text
  • src/product/mirrorDocs/makefile - lines changed 4, context: html, text, full: html, text

c2cb27e5edce6f83d4b62aee5ccc623d499f2c7c Fri Jan 15 03:17:41 2021 -0800

• escaping + signs from the right-click menu, refs #26687
  • src/hg/js/hgTracks.js - lines changed 6, context: html, text, full: html, text

29e3b0c6cf35ca263085e5f00d512ca39c65af70 Fri Jan 15 03:34:54 2021 -0800

• moving around the antibody escape tracks for wuhCor1, creating two new super tracks, refs #26806
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 24, context: html, text, full: html, text

a54c2b8ae8b819cd6ad14f49a5f4d89bfe90e4e3 Fri Jan 15 14:53:01 2021 -0800

• adding quotes for < and > in the markdown mirrorManual.txt, refs #25525
  • src/product/mirrorManual.txt - lines changed 1, context: html, text, full: html, text

9a24777746faaa236ab0bace91c6208091ea746a Fri Jan 15 14:55:33 2021 -0800

• forgot to add the html file, refs #25525
  • src/hg/htdocs/goldenPath/help/mirrorManual.html - lines changed 86, context: html, text, full: html, text

f81969f605650b79991167d351dfe092667ad60a Fri Jan 15 14:59:32 2021 -0800

• fixing merge conflict

33fcbe3b07d48d3ee11a47c6eacea01885e3a056 Fri Jan 15 16:08:57 2021 -0800

• adding little note to error message that wiggle is 1-based, no redmine
  • src/lib/bwgCreate.c - lines changed 1, context: html, text, full: html, text

a6eaca06b3b81d440a076bd6eb2b724c30a7638d Fri Jan 15 16:15:39 2021 -0800

• temporarily fixing a trackDb problem, until Monday, when the whole escape supertrack will be fixed properly, no redmine
  • src/hg/makeDb/trackDb/virus/wuhCor1/escapeMonocl.html - lines changed 107, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/escapeMonocl.ra - lines changed 2269, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 3, context: html, text, full: html, text

cd11b2eb813eb98b57ab3bbebd32c9a86737c9d5 Mon Jan 18 02:45:56 2021 -0800

• adding CADD track, refs #18492
  • src/hg/makeDb/trackDb/human/cadd.ra - lines changed 43, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 23, context: html, text, full: html, text

cab4e89a21f05ccc7633f251676b5db47614d3ac Mon Jan 18 04:57:13 2021 -0800

• making CADD full mode a bit denser, refs #18492. MaxWindowToDraw doesn't seem to work.
  • src/hg/makeDb/trackDb/human/cadd.ra - lines changed 2, context: html, text, full: html, text

eb7ba6183c194e949bc81dd1c81682338ce5d04a Mon Jan 18 07:49:25 2021 -0800

• revamping the antibody escape supertrack again, refs #26806
  • src/hg/makeDb/trackDb/virus/wuhCor1/abEscape.ra - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/bloomEsc.ra - lines changed 624, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 1, context: html, text, full: html, text