File Changes for chmalee

v409_base to v410_preview (2021-01-18 to 2021-01-25) v410

• src/hg/hgTracks/bigBedTrack.c
  • lines changed 3, context: html, text, full: html, text
    c0d5a48b95aae318fe5ab5f12b14149356d17753 Thu Jan 21 11:46:02 2021 -0800
    Support mouseOver trackDb setting for bigPsl (previously allowed but not supported) and add generic position information for bigPsl clicks, both to get lrg bigPsl otto track up to date with old version, refs #24672
• src/hg/hgc/hgc.c
  • lines changed 4, context: html, text, full: html, text
    c0d5a48b95aae318fe5ab5f12b14149356d17753 Thu Jan 21 11:46:02 2021 -0800
    Support mouseOver trackDb setting for bigPsl (previously allowed but not supported) and add generic position information for bigPsl clicks, both to get lrg bigPsl otto track up to date with old version, refs #24672
  • lines changed 10, context: html, text, full: html, text
    73e45ce8ceee39823400e8c1c7e7fc9d1d363f4c Fri Jan 22 08:40:30 2021 -0800
    Support the standard bigBed URL substitutinos in bigPsl, refs #24672
• src/hg/lib/hgFind.c
  • lines changed 1, context: html, text, full: html, text
    fbca997208c852dc1ea6d11ef9ab7f42b4378625 Tue Jan 19 10:34:09 2021 -0800
    Bump up size of buffer for mrna description in search results, refs #26832
• src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra
  • lines changed 2, context: html, text, full: html, text
    ae1c89ec531bf7384e5091b93078a138a3a24494 Fri Jan 22 11:42:05 2021 -0800
    Removing default filter on annotation type for gnomad tracks, refs bob email
• src/hg/makeDb/trackDb/human/hg38/gnomad.ra
  • lines changed 67, context: html, text, full: html, text
    92ba2942672d7b3fc8949876783ec4f8b82dd7c2 Wed Jan 20 10:06:17 2021 -0800
    Fixing up release tags, fix up pennant icon, fix up population frequencies table name for gnomAD v3.1, refs #26449
  • lines changed 1, context: html, text, full: html, text
    50277afc74c5d842e51edaca23183ec6f63ebe2d Thu Jan 21 10:32:43 2021 -0800
    Fixing typo in population frequencies table title pointed out in email by Gerardo
  • lines changed 1, context: html, text, full: html, text
    ae1c89ec531bf7384e5091b93078a138a3a24494 Fri Jan 22 11:42:05 2021 -0800
    Removing default filter on annotation type for gnomad tracks, refs bob email
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    c0d5a48b95aae318fe5ab5f12b14149356d17753 Thu Jan 21 11:46:02 2021 -0800
    Support mouseOver trackDb setting for bigPsl (previously allowed but not supported) and add generic position information for bigPsl clicks, both to get lrg bigPsl otto track up to date with old version, refs #24672
  • lines changed 2, context: html, text, full: html, text
    73e45ce8ceee39823400e8c1c7e7fc9d1d363f4c Fri Jan 22 08:40:30 2021 -0800
    Support the standard bigBed URL substitutinos in bigPsl, refs #24672
• src/utils/bedJoinTabOffset/bedJoinTabOffset.c
  • lines changed 19, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/expectedOut1.bed
  • lines changed 3, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/expectedOut2.bed
  • lines changed 3, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/in.bed
  • lines changed 3, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/in1.tab
  • lines changed 4, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/in2.tab
  • lines changed 4, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/makefile
  • lines changed 16, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837
• src/utils/bedJoinTabOffset/tests/out3.bed
  • lines changed 3, context: html, text, full: html, text
    1c36e8ebf0e5ddd3d5c3ee9fa2fd492bef5c41a0 Fri Jan 22 11:00:09 2021 -0800
    Allow bedJoinTabOffset to index on a field other than the name field, refs #26837