File Changes for kate

v411_preview2 to v411_base (2021-02-22 to 2021-03-01) v411

• src/hg/htdocs/covid19.html
  • lines changed 27, context: html, text, full: html, text
    599d664ddcf01de9da445c09ada1f199ade1f5ed Tue Feb 23 13:07:19 2021 -0800
    Update intro paragraph and add news item to COVID landing page, to highlight variant and mutations tracks.
  • lines changed 21, context: html, text, full: html, text
    c03e3225559110595d05d71774331201c15d914a Wed Feb 24 08:27:27 2021 -0800
    Update and tighten wording in intro, update Nextstrain link. refs #25217
• src/hg/makeDb/doc/wuhCor1/spikeMuts.txt
  • lines changed 169, context: html, text, full: html, text
    f759f4f5195bdfe940c7611bd28833eaa0478cfd Wed Feb 24 08:53:35 2021 -0800
    Add make doc. refs #27025
• src/hg/makeDb/doc/wuhCor1/variantMuts.txt
  • lines changed 48, context: html, text, full: html, text
    8b490c6462b2eadfa0d54ec6f101a08c4cb0723f Wed Feb 24 09:07:30 2021 -0800
    Add make doc. refs #26876
• src/hg/makeDb/trackDb/human/covidHgiGwas.ra
  • lines changed 1, context: html, text, full: html, text
    f03f959fe751f07ac02fa3d992764f07c1445c3a Wed Feb 24 09:49:04 2021 -0800
    Update stale COVID track pennanticons
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • lines changed 16, context: html, text, full: html, text
    668f464a238fdf7970b73eb574931433449cc8a9 Wed Feb 24 09:32:47 2021 -0800
    Repackage new supertrack for miRNA sites properly with release tags. refs #26287
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    f03f959fe751f07ac02fa3d992764f07c1445c3a Wed Feb 24 09:49:04 2021 -0800
    Update stale COVID track pennanticons
• src/hg/makeDb/trackDb/virus/wuhCor1/abEscape.ra
  • lines changed 5, context: html, text, full: html, text
    4fa6d811d81ed29019680c70211eca730ff1dc6e Wed Feb 24 09:50:27 2021 -0800
    Tweak wuhCor1 defaults
• src/hg/makeDb/trackDb/virus/wuhCor1/bloomEsc.ra
  • lines changed 4, context: html, text, full: html, text
    4fa6d811d81ed29019680c70211eca730ff1dc6e Wed Feb 24 09:50:27 2021 -0800
    Tweak wuhCor1 defaults
• src/hg/makeDb/trackDb/virus/wuhCor1/spikeMuts.Feb21.html
  • lines changed 67, context: html, text, full: html, text
    8ee79cb69c2e039ac29491677a2e558da9f6018a Thu Feb 18 21:11:38 2021 -0800
    Updated to include additional mutation (L452R, in CA variant), change coloring to reflect colocation in RBD domain and overlap with Bloom antibody escape, add nicknames. refs #27025
  • lines changed 25, context: html, text, full: html, text
    56734e00ddd5e16b4a16b2e02d4e2e580f1b61a2 Tue Feb 23 16:31:37 2021 -0800
    Add Data Access and Release Notes, after linking earlier files into archive dir for download. refs #27025
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra
  • lines changed 19, context: html, text, full: html, text
    8ee79cb69c2e039ac29491677a2e558da9f6018a Thu Feb 18 21:11:38 2021 -0800
    Updated to include additional mutation (L452R, in CA variant), change coloring to reflect colocation in RBD domain and overlap with Bloom antibody escape, add nicknames. refs #27025
  • lines changed 1, context: html, text, full: html, text
    79857b1c0bedbfa1610f0591a106e0710f104fa1 Mon Feb 22 14:24:44 2021 -0800
    Retire some older pennant icons
• src/hg/makeDb/trackDb/virus/wuhCor1/treangen.ra
  • lines changed 2, context: html, text, full: html, text
    79857b1c0bedbfa1610f0591a106e0710f104fa1 Mon Feb 22 14:24:44 2021 -0800
    Retire some older pennant icons
• src/hg/makeDb/trackDb/virus/wuhCor1/variantMuts.ra
  • lines changed 1, context: html, text, full: html, text
    4fa6d811d81ed29019680c70211eca730ff1dc6e Wed Feb 24 09:50:27 2021 -0800
    Tweak wuhCor1 defaults