Commits for hiram

v417_preview to v417_preview2 (2021-06-21 to 2021-06-28) v417

dcba97b3f88e88e9e59b85f87647d0ba9f2d4503 Mon Jun 21 10:56:49 2021 -0700

• replacing hgBotDelay with earlyBotCheck refs #23217
  • src/hg/hgGene/hgGene.c - lines changed 16, context: html, text, full: html, text

39be885d6a194b49917e1d01b5aee2f9db114805 Mon Jun 21 13:13:22 2021 -0700

• replacing hgBotDelayFrac with earlyBotCheck refs #23217
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 16, context: html, text, full: html, text

f73e7f5ce028d89c0ccb0a19268dc4c739746a79 Mon Jun 21 13:44:01 2021 -0700

• replacing hgBotDelayFrac with earlyBotCheck refs #23217
  • src/hg/hgBlat/hgBlat.c - lines changed 16, context: html, text, full: html, text

9ff484f7f73c81550c994b66450266b94f0d24b1 Mon Jun 21 13:44:38 2021 -0700

• replacing hgBotDelayFrac with earlyBotCheck refs #23217
  • src/hg/hgGene/hgGene.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 2, context: html, text, full: html, text

2f97e349bcd569b1da7a53ba82570f47ae32c365 Mon Jun 21 13:55:18 2021 -0700

• replacing hgBotDelayFrac with earlyBotCheck refs #23217
  • src/hg/hgc/hgc.c - lines changed 16, context: html, text, full: html, text

82b4ffe1c64351dea31fbda82f186ce0fd30675e Mon Jun 21 14:08:24 2021 -0700

• replacing hgBotDelay with earlyBotCheck refs #23217
  • src/hg/hgPcr/hgPcr.c - lines changed 16, context: html, text, full: html, text

dfd69d02b4d35ccafd84a4d712086ef61a9db487 Mon Jun 21 14:12:34 2021 -0700

• replacing hgBotDelay with earlyBotCheck refs #23217
  • src/hg/cartDump/cartDump.c - lines changed 14, context: html, text, full: html, text

b36d37d0d18dbb63cbbeefd4d22bd70046526382 Mon Jun 21 14:23:58 2021 -0700

• do not need the extra comment about the elimination of the hgBotDelay refs #23217
  • src/hg/hgBlat/hgBlat.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgGene/hgGene.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgPcr/hgPcr.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 4, context: html, text, full: html, text

d991ba970c957cf1cf454ddb19257fdb0a56bf82 Mon Jun 21 14:25:38 2021 -0700

• do not need the extra comment about the elimination of the hgBotDelay refs #23217
  • src/hg/cartDump/cartDump.c - lines changed 4, context: html, text, full: html, text

29f4bd09d8e89fdebee291c6ff2601cdb0adcf57 Mon Jun 21 14:29:46 2021 -0700

• there was another hgBotDelay in mafClick replaced by earlyBotCheck() system refs #23217
  • src/hg/hgc/hgc.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/mafClick.c - lines changed 6, context: html, text, full: html, text

0363a87914ad142f466788f47b4006eea73e1f3b Thu Jun 24 10:33:34 2021 -0700

• demote scaffoldFaToAgp from the userApps list to the UCSC only list refs #27498
  • src/hg/utils/makefile - lines changed 2, context: html, text, full: html, text

a491bbd44d8008ea1c97f3e100d34d97484e1909 Thu Jun 24 10:44:43 2021 -0700

• building the mouseStrains assemblies refs #27731
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 15, context: html, text, full: html, text

f419336d3cf8ed5a96aa852c9f3e56f408b96f49 Thu Jun 24 12:51:01 2021 -0700

• the nascient virus assembly hubs refs #27758
  • src/hg/makeDb/doc/viralAsmHub/hub.txt - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/doc/viralAsmHub/makefile - lines changed 26, context: html, text, full: html, text
  • src/hg/makeDb/doc/viralAsmHub/viral.orderList.tsv - lines changed 2, context: html, text, full: html, text