Commits for angie

v418_preview2 to v418_base (2021-07-19 to 2021-07-26) v418

1df4153e6bb5046352a48f924a8881bc4f6965d0 Tue Jul 20 10:37:04 2021 -0700

• Typo fix
  • src/hg/hgPhyloPlace/phyloPlace.c - lines changed 5, context: html, text, full: html, text

9061d3e02c215bb77e57e42e5cd22f8fd86da047 Tue Jul 20 14:02:11 2021 -0700

• New debugging fprintf from b79f8a6f8 was breaking various 'make test' diffs; show the message only when JKSQL_TRACE is set.
  • src/hg/lib/jksql.c - lines changed 1, context: html, text, full: html, text

068177454064e3437abd0e2950b853de33a6f8fe Tue Jul 20 14:18:23 2021 -0700

• Allow VCF with no genotypes. A test was failing before this, but it seems like the src/utils/makefile %.testAll target overlooks failures?
  • src/utils/vcfFilter/vcfFilter.c - lines changed 1, context: html, text, full: html, text

1d90acb00b3120e8d1347007620e6eb35a859c84 Thu Jul 22 17:26:33 2021 -0700

• Add ARTIC Primers V4 track and add V3 label to existing track, since both schemes will probably be in use for some time.
  • src/hg/makeDb/doc/wuhCor1/primers.txt - lines changed 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/articV4.html - lines changed 42, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 12, context: html, text, full: html, text