Commits for lrnassar

v419_preview to v419_preview2 (2021-08-02 to 2021-08-09) v419

0831c6df812bb7ed7883c79681e4873a12aeddca Mon Aug 2 12:59:14 2021 -0700

• Fixing trackDB and turning on uniprot all otto cron refs #27756
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.uniprot.ra - lines changed 13, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/uniprot.alpha.ra - lines changed 226, context: html, text, full: html, text

5c0821c1f1ffe84356bb0b0a6fe03f38705aefa1 Mon Aug 2 13:04:24 2021 -0700

• Squashing stale pennantIcons, no RM.
  • src/hg/makeDb/trackDb/dog/canFam4/altAllele.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam4/miRNA.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam4/structVar.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/dog/canFam4/uuGene.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/strains.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/vaccines.ra - lines changed 1, context: html, text, full: html, text

c61185431f821e1c3ca71b08130d03de507b35d8 Wed Aug 4 13:07:25 2021 -0700

• Committing the Filters Quick Start guide, refs #24327
  • src/hg/htdocs/goldenPath/help/hubQuickStartFilter.html - lines changed 526, context: html, text, full: html, text

a4bd219e77d824f808e182c7f1cc1881459dd381 Wed Aug 4 13:08:16 2021 -0700

• Adding references to the new filters quick start guide refs #24327
  • src/hg/htdocs/goldenPath/help/hgTrackHubHelp.html - lines changed 18, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml - lines changed 9, context: html, text, full: html, text

99e1611b9ef9337bb482a746b2d0fd50967304f6 Thu Aug 5 15:21:31 2021 -0700

• Adding genbank dbs missing from the rr list from the last few years. Ask Chris Lee or Lou Nassar for details if needed. No RM.
  • src/hg/makeDb/genbank/etc/rr.dbs - lines changed 22, context: html, text, full: html, text

a18a205d07a1cdae9cf89d88faf40085e9be179f Fri Aug 6 13:51:44 2021 -0700

• Releasing refSeq tracks for 16 forgotten assemblies, refs #23851
  • src/hg/makeDb/trackDb/baboon/papAnu2/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/baboon/papAnu2/trackDb.refGene.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/bonobo/panPan1/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/bonobo/panPan1/trackDb.refGene.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat8/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chicken/galGal5/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/trackDb.refGene.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/drosophila/droPer1/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/fugu/fr3/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/gator/allMis1/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur2/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/oreNil/oreNil2/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/pig/susScr3/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/pig/susScr3/trackDb.refGene.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/rhesus/rheMac8/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/rhinopithecus/rhiRox1/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/sheep/oviAri3/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tenrec/echTel2/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/zebraFinch/taeGut2/trackDb.ra - lines changed 1, context: html, text, full: html, text