File Changes for chmalee

v424_preview2 to v424_base (2021-11-22 to 2021-12-06) v424

• src/blatz/makefile
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    971b95067e2e05fb43a609875eff37500127bdc0 Tue Nov 23 10:07:17 2021 -0800
    Explicitly add -fcommon gcc option to blatz build, I don't want to mess with an old program like that
• src/hg/hgGene/hgGene.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgHubConnect/hgHubConnect.c
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    d17c507ba014280326dcbf54a3bbfd8e5f9989db Mon Nov 8 16:07:32 2021 -0800
    Fix pipeline timeout to properly ignore signal() returning non-zero, except in the case of a real error. Also get hgHubConnect to properly time out on hubCheck taking too long
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    ea752b0065368a5b24ba8dac7d28819b0869d873 Fri Dec 3 14:55:35 2021 -0800
    Fix some of the hubCheck timeout error messages as requested by qa, refs #28412
• src/hg/hgTables/hgTables.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgTracks/hgTracks.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgTracks/rnaPLFoldTrack.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/hgc.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/hgc.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/hgdpClick.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/lowelab.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/parClick.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hgc/parClick.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/hubApi/dataApi.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/inc/hapmapSnps.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/inc/loweutils.h
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/inc/versionInfo.h
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    9b267b40b1b9a6818886f2b51cf9d69b0e8b7d9e Mon Dec 6 10:20:29 2021 -0800
    New version number v424
• src/hg/lib/loweutils.c
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/lib/makefile
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/hg/pslCDnaFilter/globalNearBestFilter.h
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    df64dbe534feb014891a42b81fd11b8f395ef881 Mon Nov 22 13:19:57 2021 -0800
    Fix missing extern declaration in pslCDnaFilter
• src/inc/common.mk
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/inc/srcVersion.h
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    9b267b40b1b9a6818886f2b51cf9d69b0e8b7d9e Mon Dec 6 10:20:29 2021 -0800
    New version number v424
• src/lib/makefile
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    cd0d3f081ff261f36b65ec1016d859ce3d50cb14 Mon Apr 19 14:29:28 2021 -0700
    Add -fno-common to library makefiles to fix common extern variable definition errors
• src/lib/pipeline.c
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    d17c507ba014280326dcbf54a3bbfd8e5f9989db Mon Nov 8 16:07:32 2021 -0800
    Fix pipeline timeout to properly ignore signal() returning non-zero, except in the case of a real error. Also get hgHubConnect to properly time out on hubCheck taking too long
• src/utils/qa/weeklybld/buildEnv.csh
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    9e45eee991a29ec4b3c8e476ed1a40996607ed59 Mon Dec 6 10:10:38 2021 -0800
    v424 final build, refs #28521