Commits for hiram

v424_preview to v424_preview2 (2021-11-15 to 2021-11-22) v424

d0b2fa0cd94c4ca3783b2b41202e9797d21077ac Mon Nov 15 16:38:21 2021 -0800

• running jhead -purejpg removes massive amount of unneeded meta data no redmine
  • src/hg/htdocs/images/10.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/images/16.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/images/17.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/images/18.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/images/19.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)

59c1dfd73900ee12b22b5564fa14f28aa19d4807 Wed Nov 17 09:46:45 2021 -0800

• eliminate obsolete commented out code refs #28477
  • src/hg/utils/automation/doWindowMasker.pl - lines changed 28, context: html, text, full: html, text

936a6490897222bffd01a9117c6ea9bd9c8cd41a Wed Nov 17 10:22:28 2021 -0800

• eliminate cluster runs use simple command on whole sequence refs #28401
  • src/hg/utils/automation/doCpgIslands.pl - lines changed 89, context: html, text, full: html, text

2c8115414f9f247308f4d43fe71d2ff92b156c15 Wed Nov 17 10:31:46 2021 -0800

• correct name on bash script refs #28401
  • src/hg/utils/automation/doCpgIslands.pl - lines changed 1, context: html, text, full: html, text

c572830f58d57d62ce6d87db55efeedaa5bf6f7a Wed Nov 17 10:51:49 2021 -0800

• add note about the calculation command and where to obtain source for the program refs #28401
  • src/hg/makeDb/trackDb/cpgIslandSuper.html - lines changed 16, context: html, text, full: html, text

98314a95f0bd7c06f4a3e01573642a11abea3d31 Thu Nov 18 14:53:34 2021 -0800

• adding another bakers yeast SK1 refs #28533
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text

7595c48c018df87f5b31ce011c3136821d93b9d1 Thu Nov 18 14:53:58 2021 -0800

• adding another bakers yeast SK1 refs #28533
  • src/hg/makeDb/doc/fungiAsmHub/fungi.orderList.tsv - lines changed 2, context: html, text, full: html, text