File Changes for braney

v429_preview2 to v429_base (2022-03-28 to 2022-04-04) v429

• src/hg/hgTables/bam.c
  • lines changed 14, context: html, text, full: html, text
    3d865319000102f6164e546ddd9c959f67c664ce Wed Mar 30 13:09:30 2022 -0700
    add chromAlias support to bam support
• src/hg/hgTracks/bamTrack.c
  • lines changed 14, context: html, text, full: html, text
    3d865319000102f6164e546ddd9c959f67c664ce Wed Mar 30 13:09:30 2022 -0700
    add chromAlias support to bam support
• src/hg/hgTracks/hgTracks.c
  • lines changed 1, context: html, text, full: html, text
    e1f7896a08fb147d663f3a8339f1ad5aea037729 Tue Mar 29 17:04:52 2022 -0700
    make svgBarChart and multiRegionButtonTop be on by default
• src/hg/hgTracks/wigMafTrack.c
  • lines changed 11, context: html, text, full: html, text
    0607b89d9588aa28b12dc406d22331e3e8b013d7 Fri Apr 1 09:09:51 2022 -0700
    sometimes the maf summary table deletes the version numbers from the "other" database. If we don't find the component with a dot, look for one without it
• src/hg/hgc/bamClick.c
  • lines changed 20, context: html, text, full: html, text
    3d865319000102f6164e546ddd9c959f67c664ce Wed Mar 30 13:09:30 2022 -0700
    add chromAlias support to bam support
• src/hg/hgc/barChartClick.c
  • lines changed 1, context: html, text, full: html, text
    e1f7896a08fb147d663f3a8339f1ad5aea037729 Tue Mar 29 17:04:52 2022 -0700
    make svgBarChart and multiRegionButtonTop be on by default
• src/hg/hgc/hgc.c
  • lines changed 33, context: html, text, full: html, text
    e469259cebde62bf0bf53f582f7f69ba9a22aebc Tue Mar 29 12:28:22 2022 -0700
    allow big* tracks with only a bigDataUrl to be used in Extended DNA coloring page
  • lines changed 2, context: html, text, full: html, text
    6c2bc6c25f4bffc4f9b31ae43ec71462faee80d9 Tue Mar 29 12:55:57 2022 -0700
    accept pgSnp custom tracks in extended DNA color dialog
• src/hg/inc/featureBits.h
  • lines changed 1, context: html, text, full: html, text
    e469259cebde62bf0bf53f582f7f69ba9a22aebc Tue Mar 29 12:28:22 2022 -0700
    allow big* tracks with only a bigDataUrl to be used in Extended DNA coloring page
• src/hg/lib/featureBits.c
  • lines changed 5, context: html, text, full: html, text
    e469259cebde62bf0bf53f582f7f69ba9a22aebc Tue Mar 29 12:28:22 2022 -0700
    allow big* tracks with only a bigDataUrl to be used in Extended DNA coloring page
• src/hg/lib/hui.c
  • lines changed 7, context: html, text, full: html, text
    03e01bc588d0e171fdb2487dc036e8c481aad4e8 Wed Mar 30 16:47:50 2022 -0700
    fix bug I introduced last year that breaks ByRange and Min and Max with bigBed filters.
• src/hg/makeDb/trackDb/human/hg38/knownGene.ra
  • lines changed 1, context: html, text, full: html, text
    3445474d3a3568bf41d3f9e9fce71fc54a795bd3 Tue Mar 29 15:42:24 2022 -0700
    add missing "table" record to knownGene which tells hgTables to use that table instead of the bigGenePred
• src/hg/makeDb/trackDb/mouse/mm39/knownGene.ra
  • lines changed 1, context: html, text, full: html, text
    00ed3e61b7e4a4ddca896ff1671ab0bd664a6e85 Tue Mar 29 16:04:50 2022 -0700
    rewind mm39 on dev back to VM27 for knownGene, fix problem with hgTables using the wrong table
• src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra
  • lines changed 3, context: html, text, full: html, text
    00ed3e61b7e4a4ddca896ff1671ab0bd664a6e85 Tue Mar 29 16:04:50 2022 -0700
    rewind mm39 on dev back to VM27 for knownGene, fix problem with hgTables using the wrong table