Commits for markd

v431_preview2 to v431_base (2022-05-09 to 2022-05-16) v431

61ebfa3a2c8203b2612cf54074d12410074d04ee Tue May 10 13:57:32 2022 -0700

• add info about adding chain ids and scores to CHM13 chains
  • src/hg/makeDb/doc/chm13v2.0userData/html/hgLiftOver.html - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/chm13LiftOver.html - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/chm13LiftOver.html - lines changed 11, context: html, text, full: html, text

24d69a7106a0e67837d07d860924733c30ba66e2 Fri May 13 12:48:37 2022 -0700

• import of gencode V41 pre-release
  • src/hg/makeDb/doc/hg38/gencode.txt - lines changed 30, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/lib/gencode/biotypes.py - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/lib/gencode/gencodeTags.py - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 95, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV41.html - lines changed 47, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV41.ra - lines changed 286, context: html, text, full: html, text

05a3d177bf35df451f750276c274efc25b8acc70 Fri May 13 14:28:34 2022 -0700

• import of gencode VM30 pre-release
  • src/hg/makeDb/doc/hg38/gencode.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/mm39/gencode.txt - lines changed 33, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 95, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM30.html - lines changed 30, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM30.ra - lines changed 286, context: html, text, full: html, text