File Changes for hiram

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v444_base to v445_preview (2023-02-20 to 2023-02-27) v445

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src/hg/makeDb/doc/asmHubs/README.txt
- lines changed 84, context: html, text, full: html, text
  edc007b0a1062502c0a898866561a6e9fd870b99 Wed Feb 22 11:25:12 2023 -0800
  updated instructions for a build procedure summary no redmine
src/hg/makeDb/doc/asmHubs/master.run.list
- lines changed 2, context: html, text, full: html, text
  9ab271e61d082cb46af9d8355c3075d20bfcd115 Tue Feb 21 10:04:48 2023 -0800
  adding GCA_014183145.1_ASM1418314v1 fish Sciaenops_ocellatus per user request refs #29545
- lines changed 187, context: html, text, full: html, text
  ab44d13777c71361b5466df580e12000e9398e3f Thu Feb 23 10:02:41 2023 -0800
  catching up 187 assemblies no redmine
src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv
- lines changed 23, context: html, text, full: html, text
  e69f0e510820b9a0d0c03e9dc28b39ae54dca247 Thu Feb 23 12:44:33 2023 -0800
  catching up 15 sequences no redmine
src/hg/makeDb/doc/birdsAsmHub/birds.orderList.tsv
- lines changed 140, context: html, text, full: html, text
  0efe1dd3214edc702165e58835719d64fed38ad0 Thu Feb 23 14:46:51 2023 -0800
  adding 65 assemblies no redmine
src/hg/makeDb/doc/fishAsmHub/fish.orderList.tsv
- lines changed 1, context: html, text, full: html, text
  ec3b834428f524f840766e982911999ecc7fb0d5 Tue Feb 21 10:14:18 2023 -0800
  adding GCA_014183145.1_ASM1418314v1 fish Sciaenops_ocellatus per user request refs #29545
- lines changed 125, context: html, text, full: html, text
  ab43240882b3fde4cd5940004fc1b39261e7b401 Thu Feb 23 19:44:58 2023 -0800
  adding in 48 new assemblies no redmine
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  9e4a43d63c48374c421e91d2d004d212eb1179ca Fri Feb 24 08:50:55 2023 -0800
  correctly remove items that have moved to legacy no redmine
src/hg/makeDb/doc/fungiAsmHub/fungi.orderList.tsv
- lines changed 27, context: html, text, full: html, text
  8cd39951eaaf49dddecd4584b416e0c246b79768 Thu Feb 23 12:42:30 2023 -0800
  catching up with 10 additions no redmine
src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv
- lines changed 31, context: html, text, full: html, text
  e257810c69cfacfe1c507f809675e7f6ba081d30 Thu Feb 23 13:32:44 2023 -0800
  adding 26 assemblies no redmine
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  fc0c8a5cec5b6ea9211d786ad765f343977dbda2 Fri Feb 24 08:51:09 2023 -0800
  correctly remove items that have moved to legacy no redmine
src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt
- lines changed 25, context: html, text, full: html, text
  a0c6d4fe11228219909f2167b018e8fb383899b3 Thu Feb 23 20:58:04 2023 -0800
  update has caused a number to move to legacy no redmine
- lines changed 1, context: html, text, full: html, text
  e79092b1bcfc11fc1ff1e4a48e16e225f224d564 Thu Feb 23 21:55:03 2023 -0800
  need a definition for the single archaea which is on hgdownload no redmine
src/hg/makeDb/doc/legacyAsmHub/legacy.orderList.tsv
- lines changed 66, context: html, text, full: html, text
  a0c6d4fe11228219909f2167b018e8fb383899b3 Thu Feb 23 20:58:04 2023 -0800
  update has caused a number to move to legacy no redmine
- lines changed 1, context: html, text, full: html, text
  2bb96d765745844678cce6bfb9bce559251c4702 Fri Feb 24 08:50:17 2023 -0800
  correct name for GCA_000845685.2_ViralProj14462 no redmine
src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv
- lines changed 39, context: html, text, full: html, text
  1c51cda29df19cd8a1d53fdaa2737458baaab21b Thu Feb 23 11:28:47 2023 -0800
  catching up 13 mammal assemblies no redmine
src/hg/makeDb/doc/plantsAsmHub/plants.orderList.tsv
- lines changed 7, context: html, text, full: html, text
  a4bfa6f7e6523422644711be4c2c13333a8dc08c Thu Feb 23 12:59:48 2023 -0800
  catching up 5 sequences no redmine
src/hg/makeDb/doc/primatesAsmHub/primates.orderList.tsv
- lines changed 1, context: html, text, full: html, text
  b5c2003390bd6a3c4c7bc02d9c921e5b29a26f27 Thu Feb 23 10:29:51 2023 -0800
  update to slow loris assembly no redmine
src/hg/makeDb/doc/vertebrateAsmHub/vertebrate.orderList.tsv
- lines changed 6, context: html, text, full: html, text
  7cf46a28aa0dcdd04452cae7aa69c0bcfc1331dd Thu Feb 23 12:59:13 2023 -0800
  catching up 4 vertebrates no redmine
src/hg/makeDb/doc/vgpAsmHub/vgp.alternate.orderList.tsv
- lines changed 97, context: html, text, full: html, text
  83435b8a84bf60a2d2632a345e40fd61f670b9a5 Fri Feb 24 15:46:11 2023 -0800
  catching up the VGP alternate listing no redmine
src/hg/makeDb/doc/vgpAsmHub/vgp.legacy.orderList.tsv
- lines changed 14, context: html, text, full: html, text
  fe4e99030ede3daf6d7d368f60e1ebd6582ac7cf Fri Feb 24 14:45:11 2023 -0800
  catching up the VGP listings with current genomes no redmine
- lines changed 14, context: html, text, full: html, text
  83435b8a84bf60a2d2632a345e40fd61f670b9a5 Fri Feb 24 15:46:11 2023 -0800
  catching up the VGP alternate listing no redmine
src/hg/makeDb/doc/vgpAsmHub/vgp.primary.orderList.tsv
- lines changed 110, context: html, text, full: html, text
  fe4e99030ede3daf6d7d368f60e1ebd6582ac7cf Fri Feb 24 14:45:11 2023 -0800
  catching up the VGP listings with current genomes no redmine
src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt
- lines changed 55, context: html, text, full: html, text
  fe4e99030ede3daf6d7d368f60e1ebd6582ac7cf Fri Feb 24 14:45:11 2023 -0800
  catching up the VGP listings with current genomes no redmine
- lines changed 85, context: html, text, full: html, text
  83435b8a84bf60a2d2632a345e40fd61f670b9a5 Fri Feb 24 15:46:11 2023 -0800
  catching up the VGP alternate listing no redmine
src/hg/makeDb/doc/viralAsmHub/viral.orderList.tsv
- lines changed 2, context: html, text, full: html, text
  fd4633a9bab96bb77b10aa6ecf1667b6370d744d Fri Feb 24 08:51:34 2023 -0800
  correctly remove items that have moved to legacy no redmine
src/hg/makefile
- lines changed 1, context: html, text, full: html, text
  dede2d2b17c3c77141ba483d3c5491da7a9fc2be Wed Feb 22 13:32:21 2023 -0800
  adding pslSplitOnTarget to the userApps build refs #30675
src/hg/utils/otto/grcIncident/grcUpdate.sh
- lines changed 10, context: html, text, full: html, text
  68c790ea17562c97c9c0d54346446196a11cbd6d Thu Feb 23 11:38:13 2023 -0800
  up to date with latest fixes no redmine

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