Commits for jcasper

v445_preview to v445_preview2 (2023-02-27 to 2023-03-06) v445

b8180d9f6d41dc708a2f249ba892cbca311e7a06 Mon Feb 27 11:38:55 2023 -0800

• Adding transparency support for colors refs #30569
  • src/hg/cgilib/hvGfx.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgGenome/mainPage.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/barChartTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/cgapSageTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/expRatioTracks.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/gtexEqtlClusterTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/gtexTracks.c - lines changed 8, context: html, text, full: html, text
  • src/hg/hgTracks/interactTrack.c - lines changed 11, context: html, text, full: html, text
  • src/hg/hgTracks/loweLabTracks.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/pubsTracks.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/rnaPLFoldTrack.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 56, context: html, text, full: html, text
  • src/hg/hgTracks/variation.c - lines changed 6, context: html, text, full: html, text
  • src/hg/hgTracks/vcfTrack.c - lines changed 10, context: html, text, full: html, text
  • src/hg/hgc/expClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 3, context: html, text, full: html, text
  • src/hg/inc/hvGfx.h - lines changed 7, context: html, text, full: html, text
  • src/hg/lib/hgColors.c - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/makeGencodeKnownGene/makeGencodeKnownGene.c - lines changed 5, context: html, text, full: html, text
  • src/hg/mouseStuff/mousePoster/mousePoster.c - lines changed 34, context: html, text, full: html, text
  • src/hg/poster/finPoster/finPoster.c - lines changed 34, context: html, text, full: html, text
  • src/hg/poster/foldDb/foldDb.c - lines changed 5, context: html, text, full: html, text
  • src/hg/txGene/txGeneColor/txGeneColor.c - lines changed 4, context: html, text, full: html, text
  • src/hg/utils/genePredToBigGenePred/genePredToBigGenePred.c - lines changed 1, context: html, text, full: html, text
  • src/inc/basicBed.h - lines changed 19, context: html, text, full: html, text
  • src/inc/memgfx.h - lines changed 33, context: html, text, full: html, text
  • src/inc/psGfx.h - lines changed 4, context: html, text, full: html, text
  • src/inc/vGfx.h - lines changed 9, context: html, text, full: html, text
  • src/lib/basicBed.c - lines changed 60, context: html, text, full: html, text
  • src/lib/freeType.c - lines changed 7, context: html, text, full: html, text
  • src/lib/memgfx.c - lines changed 60, context: html, text, full: html, text
  • src/lib/psGfx.c - lines changed 52, context: html, text, full: html, text
  • src/lib/pscmGfx.c - lines changed 24, context: html, text, full: html, text
  • src/lib/vGfx.c - lines changed 3, context: html, text, full: html, text
  • src/lib/vGfxPrivate.h - lines changed 1, context: html, text, full: html, text

e0b7a6700dfca47e0723d2d5a2e5b3c745f51315 Tue Feb 28 12:38:00 2023 -0800

• Fixing a few missed cases for transparency, refs #30569
  • src/hg/hgTracks/bigBedTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/chainTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/halSnakeTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/hgTracks.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/hicTrack.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgTracks/loweLabTracks.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 3, context: html, text, full: html, text

cd01000f9a73c0dc6797f356cfd14432ed912af8 Sun Mar 5 01:11:28 2023 -0800

• Installing updated hg.conf files from UCSC servers
  • confs/asia.hg.conf - lines changed 3, context: html, text, full: html, text
  • confs/euro.hg.conf - lines changed 3, context: html, text, full: html, text
  • confs/hgwdev.hg.conf - lines changed 7, context: html, text, full: html, text
  • confs/rr.hg.conf - lines changed 3, context: html, text, full: html, text