Commits for lrnassar

v459_preview to v459_preview2 (2023-12-18 to 2024-01-02) v459

efbc896ec61ccbd94910a56f5baae6d35f93cd19 Wed Dec 20 10:40:28 2023 -0800

• Staging QA Ready the dosage sensitivity track from Collins et al 2022 for hg38 and hg19. Refs #31991
  • src/hg/lib/dosageSensitivityHaplo.as - lines changed 15, context: html, text, full: html, text
  • src/hg/lib/dosageSensitivityTriplo.as - lines changed 15, context: html, text, full: html, text
  • src/hg/makeDb/doc/dosageSensitivityCollins.txt - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/scripts/buildDosageSensitivityCollins.py - lines changed 270, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/dosageSensitivityCollins2022.html - lines changed 139, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/dosageSensitivityCollins2022.ra - lines changed 43, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 3, context: html, text, full: html, text

3f054b1a42d8327e5d69c20c630ffad3b08bfbdb Wed Dec 20 13:16:38 2023 -0800

• Adding version numbers to the gnomAD constraint tracks as requested by Anna via email (cc'd Chris too). This is in anticipation of the v4 addition to the RTS sessions.
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomad.ra - lines changed 6, context: html, text, full: html, text

89e8fdcc751e4dcbade0df175c3a68f9a7427c31 Thu Dec 28 15:15:45 2023 -0800

• Fixing up desc page grammar and flow, and changing genome to assembly in track label for consistency, refs #32287
  • src/hg/makeDb/trackDb/human/hg38/hprcArr.ra - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/hprcArrV1.html - lines changed 13, context: html, text, full: html, text

5ffdfa5d74fb31071940fc4284efa87d4e951b5d Thu Dec 28 15:24:24 2023 -0800

• Another small tweak to the labels, refs #32287
  • src/hg/makeDb/trackDb/human/hg38/hprcArr.ra - lines changed 1, context: html, text, full: html, text