Commits for chmalee

v462_preview to v462_preview2 (2024-02-26 to 2024-03-04) v462

cd8ab617cef63bd0c925c1f67e9fafe5c086d583 Mon Feb 26 11:19:13 2024 -0800

• Fix condition for whether we should print codon numbers in mouseover, refs #32815
  • src/hg/hgTracks/simpleTracks.c - lines changed 1, context: html, text, full: html, text

61f9643c131fb8ff8d1fbf75d8562c98668d61c7 Mon Feb 26 13:14:46 2024 -0800

• Make codon numbers in mouseovers show up at the cds color level and not just the cds number level, fix incorrect mouseovers on introns that was broken by previous change, refs #32815
  • src/hg/hgTracks/cds.c - lines changed 3, context: html, text, full: html, text
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text

5534d8dbbffc4d47d416eb4d75e981d10c9a8145 Tue Feb 27 15:58:38 2024 -0800

• Fix labelByCfgUi to ignore composite tracks. This removes an unnecessary stack dump from the error logs, refs #30612
  • src/hg/lib/hui.c - lines changed 3, context: html, text, full: html, text

b57ac0715b42f8f23e512e2c9bdb312b48d1933d Wed Feb 28 11:44:47 2024 -0800

• Staging gnomAD v2.1.1 non-cancer filter set, ready for QA, refs #32916
  • src/hg/makeDb/doc/hg19.txt - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra - lines changed 31, context: html, text, full: html, text

36174525f6181ecb2412a076afdf755dc226fdcd Wed Feb 28 14:48:09 2024 -0800

• Do not try to figure out bigBed type number for super tracks, refs #19984
  • src/hg/hgTracks/bigBedTrack.c - lines changed 1, context: html, text, full: html, text

73ecf418edee1ae991841f9bbf6ec5fe623407ec Fri Mar 1 15:24:02 2024 -0800

• Staging gnomAD v4 constraint track on test, refs #33084
  • src/hg/makeDb/gnomad/combine.awk - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gnomad.ra - lines changed 33, context: html, text, full: html, text

0fa824c87481cee76efea38dc2dc5214b8f94457 Mon Mar 4 09:18:39 2024 -0800

• Add constraint scores makedoc, refs #33084
  • src/hg/makeDb/doc/hg38/gnomad.txt - lines changed 7, context: html, text, full: html, text