Commits for hiram

v462_preview to v462_preview2 (2024-02-26 to 2024-03-04) v462

808b2080cee27e44ce67dd1c2efbf5dcdf7d3a09 Mon Feb 26 13:39:00 2024 -0800

• recovering the build on Darwin after OS upgrades no redmine
  • src/inc/common.mk - lines changed 43, context: html, text, full: html, text

d68fdca16fd97881c20eaf95c2a431d6536e1fa4 Mon Feb 26 17:29:51 2024 -0800

• refining the build on Mac OSX no redmine
  • src/inc/common.mk - lines changed 25, context: html, text, full: html, text

ca772477b6c6c8aad194cf39f03a20d64822b535 Wed Feb 28 11:22:36 2024 -0800

• adding two per user request refs #29545
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 3, context: html, text, full: html, text

24cf4a1294b7e146f488b877eb87b9f2e83eaa9c Wed Feb 28 17:39:28 2024 -0800

• moving static loadSizes() function from hg/utils/pslCheck.c to lib/common.c no redmine
  • src/hg/pslCheck/pslCheck.c - lines changed 13, context: html, text, full: html, text
  • src/inc/common.h - lines changed 3, context: html, text, full: html, text
  • src/lib/common.c - lines changed 14, context: html, text, full: html, text

b766d400687cd499a41a895f249557e49a381d72 Wed Feb 28 18:13:55 2024 -0800

• allow bamToPsl to fixup qSize when given a querySizes file no redmine
  • src/utils/bamToPsl/bamToPsl.c - lines changed 22, context: html, text, full: html, text

164d54ed22c894be328c9c4d7ebcdbc9c40f407e Thu Feb 29 10:53:41 2024 -0800

• loadSizes is now a src/hg/common.c function refs #33064
  • src/hg/utils/pslLiftSubrangeBlat/pslLiftSubrangeBlat.c - lines changed 12, context: html, text, full: html, text