Commits for braney

v468_base to v469_preview (2024-07-15 to 2024-07-22) v469

a3739b776a1dff6f5b07d035faa320d22c975c48 Mon Jul 15 14:08:31 2024 -0700

• make priority optional in groups.txt. Also actually sort by priority if specified
  • src/hg/inc/grp.h - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/grp.c - lines changed 12, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 9, context: html, text, full: html, text

e19d7059297b1a3d436540d3774ab1a4af71eacb Tue Jul 16 15:59:52 2024 -0700

• honor defaultIsClosed flag and sort groups by name without regard to case
  • src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/grp.c - lines changed 1, context: html, text, full: html, text

459e2288153379fa730eb1b648145bfb7bbc8dc2 Tue Jul 16 17:52:06 2024 -0700

• add rewrite rule for OMiM tracks to consolidate them in super track
  • src/hg/cgilib/cartEdit4.c - lines changed 16, context: html, text, full: html, text
  • src/hg/cgilib/cartRewrite.c - lines changed 2, context: html, text, full: html, text
  • src/hg/cgilib/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/omim.alpha.ra - lines changed 1, context: html, text, full: html, text

c36f910c093e47caa21035a3cc16bba46fb30371 Wed Jul 17 12:32:22 2024 -0700

• add a little widget to let user see aliases. Right now they're in a mouse-over
  • src/hg/hgTracks/hgTracks.c - lines changed 13, context: html, text, full: html, text

d2482e22232f8a2296fcc6706b2630f5499f7a83 Wed Jul 17 13:45:02 2024 -0700

• change chroms to chromAuthority names in hgBlat and hgPcr
  • src/hg/hgBlat/hgBlat.c - lines changed 5, context: html, text, full: html, text
  • src/hg/hgPcr/hgPcr.c - lines changed 9, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 7, context: html, text, full: html, text

13fcc22034ccaa154c07db85ce50e6ad2e843245 Wed Jul 17 15:42:49 2024 -0700

• cap each track height at 31,000
  • src/hg/hgTracks/simpleTracks.c - lines changed 4, context: html, text, full: html, text

9c5826b0163085be9b62f68597f6a8f710568101 Thu Jul 18 09:25:45 2024 -0700

• short cut for bigWigs not being positional. This was causing a problem on track hubs.
  • src/hg/lib/featureBits.c - lines changed 3, context: html, text, full: html, text

a53bf1793b4936c6f39a315b432e5f87ac57aff3 Sat Jul 20 21:08:08 2024 -0700

• take out aliases widget until someone is going to put it in the right place
  • src/hg/hgTracks/hgTracks.c - lines changed 3, context: html, text, full: html, text