Commits for hiram

967e15b3e2949b32f3874695b94b55f8923d3c15 Mon Apr 14 14:12:02 2025 -0700

use gbdb URL instead of h/ link to avoid week delay for assembly to show up in hgcentral table refs #34370
- src/hg/makeDb/doc/asmHubs/mkHubIndex.pl - lines changed 2, context: html, text, full: html, text

d2658ef3f0b1d84dc3dfc0058fa9c67219557db3 Tue Apr 15 10:24:59 2025 -0700

BRC update adding missing items
- src/hg/makeDb/doc/brcAsmHub/brc.orderList.tsv - lines changed 225, context: html, text, full: html, text

80044a35a11a2b28765d2db6a85b86e792ce65cf Tue Apr 15 12:12:01 2025 -0700

VGP update stragglers refs #29545
- src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 8, context: html, text, full: html, text

a086cac4d10bed4ed39ae97ce76f5756c2ee5b17 Tue Apr 15 15:23:46 2025 -0700

mito genes do not have the extra info fields refs #34370
- src/hg/utils/automation/updateName2.pl - lines changed 7, context: html, text, full: html, text

bc708303c647a544ce8401c2d376f282d906b387 Tue Apr 15 15:31:45 2025 -0700

VGP update refs #34370
- src/hg/makeDb/doc/mammalsAsmHub/mammals.orderList.tsv - lines changed 3, context: html, text, full: html, text

3ef4f1ee9a45852fd9bfc625bc01cea6c9981367 Wed Apr 16 13:38:00 2025 -0700

VGP update refs #34370
- src/hg/makeDb/doc/vgpAsmHub/vgp.alternate.orderList.tsv - lines changed 52, context: html, text, full: html, text
- src/hg/makeDb/doc/vgpAsmHub/vgp.legacy.orderList.tsv - lines changed 14, context: html, text, full: html, text
- src/hg/makeDb/doc/vgpAsmHub/vgp.primary.orderList.tsv - lines changed 33, context: html, text, full: html, text
- src/hg/makeDb/doc/vgpAsmHub/vgp.taxId.asmId.class.txt - lines changed 79, context: html, text, full: html, text