Commits for gperez2

v484_preview2 to v484_base (2025-06-23 to 2025-06-30) v484

71a74c027754ea2606ca4d6bcadc73c107dc3062 Tue Jun 24 10:34:47 2025 -0700

• Announcing the release of All GENCODE for hg38, hg19 (V48), and mm39 (VM37). refs #35185 #35184 ​​#35188
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 37, context: html, text, full: html, text
  • src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV47lift37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV48lift37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV47.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV48.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM36.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.ra - lines changed 1, context: html, text, full: html, text

df2541ccda1ddf3f89a4f908104d14c3b21b7e7a Tue Jun 24 11:19:55 2025 -0700

• Updating and adding pennantIcons for the All GENCODE tracks, refs #35185 #35184 #35188
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV48lift37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV48.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.ra - lines changed 1, context: html, text, full: html, text

27ad7e08d0c5752b8cc1804c5e25f075c5c7d9cf Tue Jun 24 11:47:03 2025 -0700

• Updating GENCODE V47 to V48 in the newsarch, refs #35185 #35184 #35188
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 1, context: html, text, full: html, text

e6ab425754119a63c99092d61154bf38740fcf85 Wed Jun 25 15:30:50 2025 -0700

• Updating the note on hgTables regarding gnomAD/dbSNP data leads to a timeout, refs #35907
  • src/hg/hgTables/mainPage.c - lines changed 1, context: html, text, full: html, text