Commits for braney

v488_preview to v488_preview2 (2025-09-08 to 2025-09-15) v488

254686140b97de7d7f85906dcf70f78a9601d7d0 Mon Sep 8 15:10:10 2025 -0700

• ongoing work on quickLift
  • src/hg/hgTracks/quickLift.c - lines changed 43, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgc/wiggleClick.c - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/hubConnect.c - lines changed 17, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 11, context: html, text, full: html, text

f658d6278f6d4c686f79dd8fbf8c5895380a91ed Mon Sep 8 16:48:39 2025 -0700

• ongoing fixes to quickLift
  • src/hg/hgGene/rnaStructure.c - lines changed 8, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 10, context: html, text, full: html, text
  • src/hg/lib/cart.c - lines changed 3, context: html, text, full: html, text

2f215ce23581e32e517c7d617744d12989a96fb8 Tue Sep 9 13:53:03 2025 -0700

• when writing out quickLift hubs, strip hub name off of the parent statment of children of supertracks
  • src/hg/lib/trackHub.c - lines changed 1, context: html, text, full: html, text

e8c22713a73f66943a295ed2b4912e6d8069e782 Wed Sep 10 16:54:43 2025 -0700

• allow quickLiftChain and liftOverChain tables to have different names specified in hg.conf
  • src/hg/hubApi/liftOver.c - lines changed 1, context: html, text, full: html, text
  • src/hg/inc/liftOver.h - lines changed 5, context: html, text, full: html, text
  • src/hg/inc/quickLift.h - lines changed 5, context: html, text, full: html, text
  • src/hg/lib/hubConnect.c - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/liftOver.c - lines changed 17, context: html, text, full: html, text
  • src/hg/lib/quickLift.c - lines changed 14, context: html, text, full: html, text
  • src/hg/makeDb/hgAddLiftOverChain/hgAddLiftOverChain.c - lines changed 12, context: html, text, full: html, text

51b12665a66876e1bbf7b022682a2050d4eb227d Fri Sep 12 13:03:18 2025 -0700

• some fixes for quickLifted custom tracks
  • src/hg/hgTracks/bedTrack.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/quickLift.c - lines changed 10, context: html, text, full: html, text