Commits for gperez2

v490_preview2 to v490_base (2025-10-27 to 2025-11-03) v490

c5a3038a516922f245b5964b021326598782b684 Tue Oct 28 13:58:44 2025 -0700

• Code review edits, refs #36601
  • src/hg/hgConvert/hgConvert.c - lines changed 2, context: html, text, full: html, text
  • src/hg/htdocs/covid19.html - lines changed 1, context: html, text, full: html, text

f2560d1931f0c4f135608db9618d5871f2c2f98a Tue Oct 28 14:04:36 2025 -0700

• Fixing a sentence, refs #35536
  • src/hg/hgConvert/hgConvert.c - lines changed 1, context: html, text, full: html, text

57bbece80601cd19b99c32f2126aba136d3fc83c Tue Oct 28 16:16:06 2025 -0700

• Code review suggestion from Jairo, refs #36601
  • src/hg/hgConvert/hgConvert.c - lines changed 1, context: html, text, full: html, text

410bc23ea2ad4369745b5f80f2f805bd81e201e4 Wed Oct 29 17:41:51 2025 -0700

• Staging 3 All GENCODE tracks, refs #36170 #36168 #36166
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV48lift37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV49lift37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV48.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV49.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM37.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/wgEncodeGencodeVM38.ra - lines changed 1, context: html, text, full: html, text

755b77137deee2a6ca9375f3f483bd38b2d4aa08 Wed Oct 29 22:08:13 2025 -0700

• Staging the GENCODE v49/v49lift37/vM38 KnownGene tracks on hgwbeta, refs #36169 #36167 #36165
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra - lines changed 2, context: html, text, full: html, text

dda3eb3d495822ace30e65e2ba1c89cc98ea6be9 Thu Oct 30 11:21:52 2025 -0700

• Adding Bluesky to the page and some other updates, No RM
  • src/hg/htdocs/maintenance.html - lines changed 19, context: html, text, full: html, text

c15a59c6ddc7428025519ec671af0a7d4649d7be Thu Oct 30 16:50:26 2025 -0700

• Releasing the new GENCODE Known Gene tracks V49, v49lift37, and VM38, refs #36169 #36167 #36165
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 64, context: html, text, full: html, text
  • src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/knownGene.alpha.ra - lines changed 46, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/knownGene.ra - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/knownGene.alpha.ra - lines changed 60, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/knownGene.ra - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/knownGene.alpha.ra - lines changed 41, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/knownGene.ra - lines changed 7, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm39/trackDb.ra - lines changed 2, context: html, text, full: html, text