Commits for hiram

v484_base to v485_preview (2025-06-30 to 2025-07-07) v485

d5a014d673b87e3818fd67a6458eae70e1b0c169 Mon Jun 30 15:46:08 2025 -0700

• finish off the HPRC update refs #35415
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 50, context: html, text, full: html, text
  • src/hg/makeDb/doc/primatesAsmHub/primates.orderList.tsv - lines changed 50, context: html, text, full: html, text

90251c6317fe6ed1f8675d5759e924034f1c8456 Mon Jun 30 16:39:04 2025 -0700

• finish off the HPRC update refs move obsolets to legacy #35415
  • src/hg/makeDb/doc/legacyAsmHub/legacy.clade.txt - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/doc/legacyAsmHub/legacy.orderList.tsv - lines changed 16, context: html, text, full: html, text
  • src/hg/makeDb/doc/primatesAsmHub/primates.orderList.tsv - lines changed 464, context: html, text, full: html, text

ec4be1f046b60cc6fa453938884ece42327e130a Mon Jun 30 20:47:25 2025 -0700

• updated to 464 latest edition of HPRC refs 35415
  • src/hg/makeDb/doc/hprcAsmHub/hprc.orderList.tsv - lines changed 464, context: html, text, full: html, text

478f9fe57277877ef7ef8e445a312ec9788a1b48 Wed Jul 2 22:26:33 2025 -0700

• the check for the successful hAllocConn will never get there as it will crash with the attempted connection refs #36030
  • src/hg/lib/asmEquivalent.c - lines changed 1, context: html, text, full: html, text

a2d13b7983fe1ae6696a7dcfe77e34ac64b7f6a9 Thu Jul 3 19:04:12 2025 -0700

• add one per user request refs #29545
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv - lines changed 1, context: html, text, full: html, text

e4408769134157e7443af0059351f2f562a95a41 Sun Jul 6 13:17:02 2025 -0700

• adding several per user request refs #29545
  • src/hg/makeDb/doc/asmHubs/master.run.list - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/doc/bacteriaAsmHub/bacteria.orderList.tsv - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/doc/invertebrateAsmHub/invertebrate.orderList.tsv - lines changed 2, context: html, text, full: html, text