rhead: changes by commit

branch to review (2009-05-26 to 2009-06-02) v207

• Removed broken link to Release 3.2 heterochromatic sequence.
  • src/hg/makeDb/trackDb/drosophila/dm2/description.html 1.9 - lines changed: 3, context: html, text, full: html, text
• Changed links to specific worm data freezes to generic wormbase links, at least temporarily.
  • src/hg/makeDb/trackDb/worm/ce4/description.html 1.7 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce4/gap.html 1.4 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce4/gold.html 1.5 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce5/description.html 1.2 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce5/gap.html 1.2 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce5/gold.html 1.2 - lines changed: 5, context: html, text, full: html, text
• Removed broken link to transcriptomes.org, which has not worked for several months.
  • src/hg/makeDb/trackDb/cgapSage.html 1.21 - lines changed: 3, context: html, text, full: html, text
• Removed unused variable, changed date format slightly.
  • src/utils/qa/doGenbankTests 1.10 - lines changed: 6, context: html, text, full: html, text
• Added special handling for intronEst in split form. Also changed a variable name.
  • src/utils/qa/doGenbankTests 1.11 - lines changed: 35, context: html, text, full: html, text
• Simplified some if statements.
  • src/utils/qa/doGenbankTests 1.12 - lines changed: 4, context: html, text, full: html, text
• Simplified getting intronEst table names even further (and logic was backwards in last commit).
  • src/utils/qa/doGenbankTests 1.13 - lines changed: 7, context: html, text, full: html, text
• Removed session ID from link to Nature Methods, which was causing an html error 404
  • src/hg/makeDb/trackDb/human/hg17/dukeDnaseCd4Signal.html 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/dukeDnaseCd4Sites.html 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/dukeDnaseHsCd4Pval.html 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/dukeDnaseHsCd4Sites.html 1.3 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/dukeDnaseSuper.html 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/encodeNhgriDnaseHsChipRaw.html 1.3 - lines changed: 1, context: html, text, full: html, text
• Fixed broken Exogean link.
  • src/hg/makeDb/trackDb/human/encodeEgaspFull.html 1.10 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/encodeEgaspUpdate.html 1.8 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/encodeEgaspSuper.html 1.10 - lines changed: 1, context: html, text, full: html, text
• Fixed broken link to Bioinformatics Institute of Singapore.
  • src/hg/makeDb/trackDb/human/hg16/encodeGisRnaPet.html 1.10 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg17/encodeGisRnaPet.html 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/encodeGisRnaPet.html 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeGisRnaPet.html 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeGisSuper.html 1.4 - lines changed: 1, context: html, text, full: html, text