kuhn: changes by file

review to branch (2009-09-09 to 2009-09-15) v215

• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.520 lines changed: 18, context: html, text, full: html, text
    added a hyphen in All-Exon Array longLabels for UW tracks
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra
  • 1.61 lines changed: 8, context: html, text, full: html, text
    changed labels on hg18 chain/nets from orgName db
  • 1.60 lines changed: 24, context: html, text, full: html, text
    moved all searches to bottom, as per usual practice
• src/hg/makeDb/trackDb/rat/rn4/trackDb.ra
  • 1.39 lines changed: 34, context: html, text, full: html, text
    moved all searches to bottom, as per usual practice
• src/utils/qa/alertBqueue.csh
  • 1.11 lines changed: 3, context: html, text, full: html, text
    added donna to email list for monthly reminder
• src/utils/qa/checkSync.csh
  • 1.18 lines changed: 2, context: html, text, full: html, text
    put GENBANK variable in central place, to simplify finding the genbank tablelist. changed checkSync.csh to use it
• src/utils/qa/countRows.csh
  • 1.10 lines changed: 8, context: html, text, full: html, text
    added RR results, though not in real time
  • 1.9 lines changed: 3, context: html, text, full: html, text
    removed some debugging statements
  • 1.8 lines changed: 57, context: html, text, full: html, text
    simplified to remove extra processing, including dependence on writing files. fixed so actual rowcount is printed, instead of message that dev and beta agree
• src/utils/qa/getRRdumpfile.csh
  • 1.5 lines changed: 19, context: html, text, full: html, text
    adjusted getRR to look in the dumps for dev and beta values, too. fixed getTableSize.csh to use them properly
• src/utils/qa/getRRtableStatus.csh
  • 1.13 lines changed: 16, context: html, text, full: html, text
    adjusted getRR to look in the dumps for dev and beta values, too. fixed getTableSize.csh to use them properly
• src/utils/qa/getTableSize.csh
  • 1.3 lines changed: 11, context: html, text, full: html, text
    adjusted getRR to look in the dumps for dev and beta values, too. fixed getTableSize.csh to use them properly
• src/utils/qa/qaConfig.bash
  • 1.4 lines changed: 1, context: html, text, full: html, text
    put GENBANK variable in central place, to simplify finding the genbank tablelist. changed checkSync.csh to use it
• src/utils/qa/qaConfig.csh
  • 1.4 lines changed: 1, context: html, text, full: html, text
    put GENBANK variable in central place, to simplify finding the genbank tablelist. changed checkSync.csh to use it