kuhn: changes by commit

review to branch (2009-09-09 to 2009-09-15) v215

• put GENBANK variable in central place, to simplify finding the genbank tablelist. changed checkSync.csh to use it
  • src/utils/qa/checkSync.csh 1.18 - lines changed: 2, context: html, text, full: html, text
  • src/utils/qa/qaConfig.bash 1.4 - lines changed: 1, context: html, text, full: html, text
  • src/utils/qa/qaConfig.csh 1.4 - lines changed: 1, context: html, text, full: html, text
• simplified to remove extra processing, including dependence on writing files. fixed so actual rowcount is printed, instead of message that dev and beta agree
  • src/utils/qa/countRows.csh 1.8 - lines changed: 57, context: html, text, full: html, text
• adjusted getRR to look in the dumps for dev and beta values, too. fixed getTableSize.csh to use them properly
  • src/utils/qa/getRRdumpfile.csh 1.5 - lines changed: 19, context: html, text, full: html, text
  • src/utils/qa/getRRtableStatus.csh 1.13 - lines changed: 16, context: html, text, full: html, text
  • src/utils/qa/getTableSize.csh 1.3 - lines changed: 11, context: html, text, full: html, text
• removed some debugging statements
  • src/utils/qa/countRows.csh 1.9 - lines changed: 3, context: html, text, full: html, text
• added RR results, though not in real time
  • src/utils/qa/countRows.csh 1.10 - lines changed: 8, context: html, text, full: html, text
• added donna to email list for monthly reminder
  • src/utils/qa/alertBqueue.csh 1.11 - lines changed: 3, context: html, text, full: html, text
• changed labels on hg18 chain/nets from orgName db
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.61 - lines changed: 8, context: html, text, full: html, text
• moved all searches to bottom, as per usual practice
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra 1.60 - lines changed: 24, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/rat/rn4/trackDb.ra 1.39 - lines changed: 34, context: html, text, full: html, text
• added a hyphen in All-Exon Array longLabels for UW tracks
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.520 - lines changed: 18, context: html, text, full: html, text