Commits for angie
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v253_preview to v253_preview2 (2011-06-14 to 2011-06-21) v253
- Bug #4302 (link in table schema for BAM files gives a 404):Fixed broken link to SAM spec, and removed dead code (that had the correct link
but is no longer exercised).
- src/hg/hgTables/schema.c - lines changed 4, context: html, text, full: html, text
- Track #1091 (MGI/Jackson Lab Tracks update): got new data from BobSinclair at MGI. There are a couple new phenotypes, that apparently
have subsumed a few of the old phenotypes; I added links to MGI's
Mammalian Phenotype Browser pages from our details page's table of
phenotypes. The files from MGI include both old and new phenotypes.
Finally moved the 5+ year old perl scripts into the source tree
instead of inlining them (or not) in mm9.txt.
- src/hg/jaxMgi/parseAllele.pl - lines changed 92, context: html, text, full: html, text
- src/hg/jaxMgi/parsePhenotype.pl - lines changed 61, context: html, text, full: html, text
- src/hg/jaxMgi/parsePhenotypicAllele.pl - lines changed 100, context: html, text, full: html, text
- src/hg/jaxMgi/parseRepTranscript.pl - lines changed 68, context: html, text, full: html, text
- src/hg/makeDb/doc/mm9.txt - lines changed 217, context: html, text, full: html, text
- src/hg/makeDb/schema/all.joiner - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/jaxPhenotype.html - lines changed 96, context: html, text, full: html, text
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