File Changes for wong

v261_base to v262_preview (2012-01-03 to 2012-01-10) v262

• python/lib/ucscgenomics/cv.py
  • lines changed 1, context: html, text, full: html, text
    correct wrong type of quotes
• python/lib/ucscgenomics/ra.py
  • lines changed 50, context: html, text, full: html, text
    first draft of raMerging functions
  • lines changed 3, context: html, text, full: html, text
    had drop vs new backwards
• python/lib/ucscgenomics/ucscUtils.py
  • lines changed 94, context: html, text, full: html, text
    first draft of raMerging functions
  • lines changed 4, context: html, text, full: html, text
    no more missed duplicated comments
• src/hg/encode/encodeMkFilesList/encodeMkFilesList
  • lines changed 6, context: html, text, full: html, text
    added functionality to automatically set self scheduling to 19, complains on failure, but doesn't die.
• src/hg/encode/encodeQaInit/encodeQaInit
  • lines changed 2, context: html, text, full: html, text
    added release number to releaseLog value of the sql file
• src/hg/encode/encodeQaPrepareRelease/encodeQaPrepareRelease
  • lines changed 442, context: html, text, full: html, text
    moved old version to .pl
  • lines changed 151, context: html, text, full: html, text
    first draft of python verison of encodeQaPrepareReleae
• src/hg/encode/encodeQaPrepareRelease/encodeQaPrepareRelease.pl
  • lines changed 442, context: html, text, full: html, text
    moved old version to .pl
• src/hg/encode/qaRaDiff/makefile
  • lines changed 27, context: html, text, full: html, text
    renamed qaRaDiff to raDiff
• src/hg/encode/qaRaDiff/qaRaDiff
  • lines changed 51, context: html, text, full: html, text
    renamed qaRaDiff to raDiff
• src/hg/encode/raDiff/makefile
  • lines changed 27, context: html, text, full: html, text
    renamed qaRaDiff to raDiff
  • lines changed 2, context: html, text, full: html, text
    fixed makefile name
• src/hg/encode/raDiff/raDiff
  • lines changed 51, context: html, text, full: html, text
    renamed qaRaDiff to raDiff
  • lines changed 0, context: html, text, full: html, text
    changed whitespace to 4 spaces instead of tabs
• src/hg/encode/raMerge/makefile
  • lines changed 27, context: html, text, full: html, text
    first draft of raMerging functions
• src/hg/encode/raMerge/raMerge
  • lines changed 31, context: html, text, full: html, text
    first draft of raMerging functions
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra
  • lines changed 1342, context: html, text, full: html, text
    added in new haib tfbs tracks
  • lines changed 59, context: html, text, full: html, text
    added in bais
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra
  • lines changed 633, context: html, text, full: html, text
    added in new open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra
  • lines changed 965, context: html, text, full: html, text
    added in new tracks to sydh tfbs
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra
  • lines changed 233, context: html, text, full: html, text
    added in new uw dgf tracks
  • lines changed 25, context: html, text, full: html, text
    corrected some metadata errors
  • lines changed 13, context: html, text, full: html, text
    removed erroneous accession
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.release2.ra
  • lines changed 254, context: html, text, full: html, text
    added in new haib tfbs tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.new.ra
  • lines changed 122, context: html, text, full: html, text
    added in new open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.new.ra
  • lines changed 128, context: html, text, full: html, text
    added in new tracks to sydh tfbs
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.new.ra
  • lines changed 85, context: html, text, full: html, text
    added in new uw dgf tracks