Commits for tdreszer
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v262_preview to v262_preview2 (2012-01-10 to 2012-01-17) v262
- Initial check-in of not yet comple subtrack configuration module.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 5, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 2, context: html, text, full: html, text
- A couple were missed in the big first checkin of subtrack cfg.
- src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 2, context: html, text, full: html, text
- Clickable class should get a hand.
- src/hg/htdocs/style/HGStyle.css - lines changed 2, context: html, text, full: html, text
- Just want to check in ifdefed code while working on 2 possible paths to take.
- Support (in progress) for subtrack vis as separate control.
- src/hg/htdocs/style/HGStyle.css - lines changed 2, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 23, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- More subCfg work. Need to check in to switch branches cleanly.
- src/hg/htdocs/style/HGStyle.css - lines changed 3, context: html, text, full: html, text
- Merge.
- Only a tiny incremental change beofre I must return to the master branch.
- Merge branch 'master' into tdreszer-subCfg
- More incremental changes before i most switch back to the master brqanch
- Merge branch 'master' into tdreszer-subCfg
- More incremental work on subCfg
- src/hg/hgTracks/imageV2.h - lines changed 3, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Merge branches 'master' and 'master' into tdreszer-subCfg
- src/hg/hgTracks/imageV2.h - lines changed 5, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Fix merge conflict.
- src/hg/htdocs/style/HGStyle.css - lines changed 4, context: html, text, full: html, text
- Big load of changes for subCfg.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 6, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Another load of subCfg module (scm). Heavy work getting subCbs, matCbs and views all playing nice.
- src/hg/htdocs/style/HGStyle.css - lines changed 3, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Tightened a few more screws on subCfg
- Merge branch 'master' into tdreszer-subCfg
- Major rework of subCfg module to no longer rely upon removing name at initialization.
- Drag and drop subtracks only on when requested AND not sortable.
- Merge branch 'master' into tdreszer-subCfg
- A few nice bug catches due to walking through code in firebug.
- Merge branch 'master' into tdreszer-subCfg
- Changes to fix redmine 4892 composite/view/subtrack inconsistency.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 122, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 23, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Merge conflict resolved.
- Further fixes to the cfgByType consistency logic, prompted by side by side comparisons on hg18 tracks.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 104, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- More screw tightening. Encode peaks are not configurable unless there are additional trackDb settings that say so.
- src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 4, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Cleaned up old 'newJQuery' dependencies. We are always running as newJQuery now.
- src/hg/js/autocomplete.js - lines changed 2, context: html, text, full: html, text
- src/hg/js/hgGateway.js - lines changed 19, context: html, text, full: html, text
- More tightening of screws. Several special cases solved. Altererd which right-click menu items for cfg appear and regularized this with subCfg availability.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 2, context: html, text, full: html, text
- src/hg/hgTracks/imageV2.c - lines changed 6, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 40, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Another set of fixes propted by going through all of hg19 again and another 7 assemblies from different species and clades.
- src/hg/hgTracks/imageV2.c - lines changed 3, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 2, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Minor change to protect variable for SUBTRACK_CONFIG only code.
- Merge branch 'master' into tdreszer-subCfg
- With subCfg, when only one subtrack, highlevel shouuld show subtrack controls, so that rightClick and subCfg work together.
- src/hg/hgTracks/imageV2.c - lines changed 3, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 9, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Major work on bedFilt, psl and wigMaf to make them properly composite ready.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 52, context: html, text, full: html, text
- src/hg/hgTracks/bedTrack.c - lines changed 7, context: html, text, full: html, text
- src/hg/hgTracks/pslTrack.c - lines changed 5, context: html, text, full: html, text
- src/hg/hgTracks/wigMafTrack.c - lines changed 80, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 1, context: html, text, full: html, text
- Slight adjustment to one API
- src/hg/hgTracks/wigMafTrack.c - lines changed 2, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Fix up a merge
- src/hg/js/hgTracks.js - lines changed 2367, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Fixed up merge mess.
- Fixed merge-o-mangla.
- Merge branch 'master' into tdreszer-subCfg
- Merge mixup fixed.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- knocked off another couple of minor bugs in js.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Eliminated a couple more vars from cart and FINALY got rid of funky comp.view.vis cart name. All vis is not standardized to trackName since view is a track.
- src/hg/hgTracks/simpleTracks.c - lines changed 4, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Working towards fix in viewVis reshaping.
- Merge branch 'master' into tdreszer-subCfg
- Plugged that viewVis override bug
- Record keeping
- Merge mixup mashup
- src/hg/lib/trackDbCustom.c - lines changed 66, context: html, text, full: html, text
- Little more merge madness
- Merge up straighten out.
- Merge madness again.
- Fixed one timy bug using 'use strict'
- merge madness
- src/hg/htdocs/style/HGStyle.css - lines changed 56, context: html, text, full: html, text
- Merge-o-mania.
- src/hg/htdocs/style/HGStyle.css - lines changed 41, context: html, text, full: html, text
- Turned on matrix squeezing.
- src/hg/htdocs/style/HGStyle.css - lines changed 2, context: html, text, full: html, text
- Exclude IE <9 from particilating in matrixSqueeze
- src/hg/htdocs/style/HGStyle.css - lines changed 5, context: html, text, full: html, text
- matrix side labels don't need too tips.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- IE 9 text rotation conflicts with IE<9 rotation. Removing IE<9 support.
- src/hg/htdocs/style/HGStyle.css - lines changed 4, context: html, text, full: html, text
- Took care of some of the matrix hilite ghosting. Is it enough?
- merge-o-matic mania
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Getting rid of the last vestiges of NEW_JQUERY ifdef.
- src/hg/hgFileSearch/hgFileSearch.c - lines changed 6, context: html, text, full: html, text
- src/hg/hgGateway/hgGateway.c - lines changed 11, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
- src/hg/hgTracks/searchTracks.c - lines changed 6, context: html, text, full: html, text
- Fixed bug where track search advanced ddcl's were being duplicated.
- define tdbIsDataTrack()
- Added cancel button for composite configuration.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 8, context: html, text, full: html, text
- Better buttoning.
- src/hg/htdocs/style/HGStyle.css - lines changed 10, context: html, text, full: html, text
- More plus/minus button stylings
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 10, context: html, text, full: html, text
- src/hg/hgTracks/searchTracks.c - lines changed 10, context: html, text, full: html, text
- src/hg/htdocs/style/HGStyle.css - lines changed 5, context: html, text, full: html, text
- More touches on BUTTONS_BY_CSS
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 6, context: html, text, full: html, text
- src/hg/hgTracks/config.c - lines changed 5, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.c - lines changed 5, context: html, text, full: html, text
- src/hg/hgTracks/searchTracks.c - lines changed 8, context: html, text, full: html, text
- src/hg/htdocs/style/HGStyle.css - lines changed 2, context: html, text, full: html, text
- Extend new buttons to search rows. Fixed some current bugs in the search tab [-][+] buttons
- Merg-o-rama
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 127, context: html, text, full: html, text
- src/hg/htdocs/style/HGStyle.css - lines changed 16, context: html, text, full: html, text
- Merge-o-rama
- src/hg/htdocs/style/HGStyle.css - lines changed 3, context: html, text, full: html, text
- Katrina does not want buttons by CSS yet.
- Merge branch 'master' into tdreszer-subCfg
- src/hg/hgFileSearch/hgFileSearch.c - lines changed 7, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 2, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- subCfg was not getting initialized if there were no subCfgs. But subVis should also kick this off.
- IE8 triggers a second onchange event. Add protection when a function is launched with a waitmask.
- Fixed subtrack sort loosing user setting in drop downs and fixed IE9 subVisDD being unclickable.
- Fixed the tableSort. insertBefore is effective BUT you shouldn't insert before yourself, at least in IE8.
- Chrome also has interference between dragAndDrop and subVisDD.
- Same problem in safari: drag and drop don't play with subtrack vis dropdown.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Make [add][clear] buttons use the same javascript that matrix [+][-] buttons use.
- Merge branch 'master' into tdreszer-subCfg
- Minor cleanup to hui.c Fix edge case bug in hgTracks.js where right click is lost.
- Some older composites have packable children which are seen in rightClick as unpackable. The mixed case that gives rise to this should not be allowed now, but we can support it for those older composites. The rule is, if any single subtrack is packable, then the whole tree is.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 4, context: html, text, full: html, text
- src/hg/hgTracks/config.c - lines changed 1, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.c - lines changed 1, context: html, text, full: html, text
- src/hg/hgTracks/imageV2.c - lines changed 1, context: html, text, full: html, text
- src/hg/lib/trackDbCustom.c - lines changed 34, context: html, text, full: html, text
- Just a changed name tree wide. The 'compositeLevel' paramter to closestToHome cart functions was confusing. What it means is the request is for a setting one step above the tdb passed in. It is used for view level controls where the model tdb is a subtrack. This checkin has NO functional affect.
- src/hg/hgTracks/bamTrack.c - lines changed 5, context: html, text, full: html, text
- src/hg/lib/wiggleCart.c - lines changed 24, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Fixed bug where view starts with digit.
- Turns out at least on browser (linux/FF) sends unnamed inputs to the cart. Therefore, unchanged controls are no 'disabled' before submit.
- Update multiView help to include a short section on subtrack configuration.
- src/hg/htdocs/goldenPath/help/multiView.html - lines changed 34, context: html, text, full: html, text
- Merge branch 'master' into tdreszer-subCfg
- Objectified sortTable and filterTable but no functional change is here.
- src/hg/encode/hgEncodeVocab/hgEncodeVocab.c - lines changed 1, context: html, text, full: html, text
- Substantial speed up of long table sort. IE needs every bit of help it can get.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Removed some old ifdefs. No functional change here.
- Removed old ifdefs. No functional change here.
- src/hg/hgTracks/config.c - lines changed 110, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.c - lines changed 19, context: html, text, full: html, text
- src/hg/hgTracks/hgTracks.h - lines changed 5, context: html, text, full: html, text
- src/hg/hgTracks/imageV2.c - lines changed 12, context: html, text, full: html, text
- src/hg/hgTracks/imageV2.h - lines changed 7, context: html, text, full: html, text
- src/hg/hgTracks/netTrack.c - lines changed 4, context: html, text, full: html, text
- src/hg/hgTracks/searchTracks.c - lines changed 7, context: html, text, full: html, text
- src/hg/hgTracks/simpleTracks.c - lines changed 4, context: html, text, full: html, text
- Removing old ifdefs. No functional changes here.
- Removing old ifdefs. No functional changes here.
- Removing old ifdef. No functional change here.
- Massive sorts on IE9 were still dying, until I replaced using 'sorting' class with 'showLoadingImage()'. The loading image eliminateates redrawing on every little change.
- Merge branch 'master' into tdreszer-subCfg
- Merge branch 'master' into tdreszer-subCfg
- Adding an ectra column to subtrack list so that drag and drop works with subVis. 4665
- tagEncoding needed to be extended to the ABC dimensions default checked logic.
- v262 preview2
- src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text
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