All File Changes

v269_base to v270_preview (2012-06-26 to 2012-07-03) v270

• src/hg/encode/DAFs/3.0/hg19/wgEncodeGisRnaPet.daf
  • lines changed 3, context: html, text, full: html, text
    Updating DAFs
• src/hg/encode/DAFs/3.0/hg19/wgEncodeUwAffyExonArray.daf
  • lines changed 12, context: html, text, full: html, text
    Updating DAFs
• src/hg/encode/cellTypeParser/cellTypeParser.py
  • lines changed 2, context: html, text, full: html, text
    cleaning output by cleaning conditionals
• src/hg/encode/hgEncodeApi/hgEncodeApi.c
  • lines changed 4, context: html, text, full: html, text
    Retire use of preview server as backup for experiment table. It is now pushed regularly to public server
• src/hg/encode/validateFiles/validateFiles.c
  • lines changed 61, context: html, text, full: html, text
    Trying to clarify the uasge statement
• src/hg/hgGene/hgGene.c
  • lines changed 24, context: html, text, full: html, text
    add some more info about the CDS start and end (#8249)
• src/hg/hgGene/hgGeneData/C_elegans/links.ra
  • lines changed 7, context: html, text, full: html, text
    add support for MOPED link-out in hgGene (#6156) in human, mouse, and worm.
• src/hg/hgGene/hgGeneData/links.ra
  • lines changed 7, context: html, text, full: html, text
    add support for MOPED link-out in hgGene (#6156) in human, mouse, and worm.
• src/hg/hgLogin/hgLogin.c
  • lines changed 10, context: html, text, full: html, text
    Bug #8341 Do not send user name to non-exist email address.
  • lines changed 4, context: html, text, full: html, text
    Fixing stricter gcc compile warnings: use safecpy instead of safef when there is no format string ("%s").
• src/hg/hgTables/hgTables.c
  • lines changed 2, context: html, text, full: html, text
    use isErrAbortInProgress to avoid turning other people's warn's to errAbort's
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 1, context: html, text, full: html, text
    fix default for xenoRefGene labels to be the gene name (#8365)
• src/hg/htdocs/ENCODE/qualityMetrics.html
  • lines changed 13, context: html, text, full: html, text
    Responses to review by Katrina (#7780). Use publish link for spreadsheet, remove .csv at google docs doesn't support multiple worksheet export in that format. Edits for consistency (Quality Metrics portal page)
  • lines changed 7, context: html, text, full: html, text
    Edits for clarity (from QA review, #7780, Quality metrics page)
• src/hg/htdocs/goldenPath/credits.html
  • lines changed 57, context: html, text, full: html, text
    Added tenrec section (redmine #7671)
• src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.css
  • lines changed 107, context: html, text, full: html, text
    Changes as recommended by Kate, Greg, outside user, Jim. Also some things I polished.
• src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html
  • lines changed 46, context: html, text, full: html, text
    Changes as recommended by Kate, Greg, outside user, Jim. Also some things I polished.
  • lines changed 1, context: html, text, full: html, text
    Donna's early input has been incorporated.
  • lines changed 8, context: html, text, full: html, text
    Straightened out some confusion between maxItems, maxWindowToDraw and maxWindowToQuery
• src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.js
  • lines changed 2, context: html, text, full: html, text
    Changes as recommended by Kate, Greg, outside user, Jim. Also some things I polished.
• src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
  • lines changed 376, context: html, text, full: html, text
    Changes as recommended by Kate, Greg, outside user, Jim. Also some things I polished.
  • lines changed 33, context: html, text, full: html, text
    Minor changes to library description. This how to should be moved to it's own README at some point.
  • lines changed 114, context: html, text, full: html, text
    Donna's early input has been incorporated.
  • lines changed 34, context: html, text, full: html, text
    Straightened out some confusion between maxItems, maxWindowToDraw and maxWindowToQuery
• src/hg/htdocs/goldenPath/help/wiggle.html
  • lines changed 53, context: html, text, full: html, text
    Made revisions based on Tim's suggestions (redmine #6866)
• src/hg/htdocs/goldenPath/help/wikiTrack.html
  • lines changed 73, context: html, text, full: html, text
    Made modifications discussed in redmine #8332
• src/hg/htdocs/goldenPath/newsarch.html
  • lines changed 134, context: html, text, full: html, text
    Added news announcement about several new assemblies, and archived some items.
• src/hg/htdocs/images/Papio_anubis.jpg
  • lines changed 0, context: html, text, full: html, text
    Image of Olive baboon (papAnu1) from mediawiki commons.
• src/hg/htdocs/images/Papio_hamadryas_anubis.jpg
  • lines changed 0, context: html, text, full: html, text
    Rename Papio_anubias.jpg to Papio_hamadryas_anubis.jpg to avoid conflict with papAnu1.
• src/hg/htdocs/indexNews.html
  • lines changed 172, context: html, text, full: html, text
    Added news announcement about several new assemblies, and archived some items.
• src/hg/js/encodeChipMatrix.js
  • lines changed 7, context: html, text, full: html, text
    Add special-casing to separate out Small RNA as a separate data type
• src/hg/js/encodeDataMatrix.js
  • lines changed 6, context: html, text, full: html, text
    Add special-casing to separate out Small RNA as a separate data type
• src/hg/js/encodeDataSummary.js
  • lines changed 7, context: html, text, full: html, text
    Add special-casing to separate out Small RNA as a separate data type
• src/hg/js/encodeMatrix.js
  • lines changed 6, context: html, text, full: html, text
    Add special-casing to separate out Small RNA as a separate data type
• src/hg/js/encodeProject.js
  • lines changed 50, context: html, text, full: html, text
    Add special-casing to separate out Small RNA as a separate data type
• src/hg/lib/botDelay.c
  • lines changed 31, context: html, text, full: html, text
    improving botDelay to give us control to allow our own robots to run unbottlenecked if desired via hg.conf setting bottleneck.except
• src/hg/lib/jksql.c
  • lines changed 3, context: html, text, full: html, text
    removing unneeded flag for detect mysql load warnings
• src/hg/makeDb/doc/bosTau6.txt
  • lines changed 29, context: html, text, full: html, text
    Finished LASTZ mm10 vs bosTau6.
  • lines changed 25, context: html, text, full: html, text
    Finished LASTZ dog canFam3 vs cow bosTau6.
• src/hg/makeDb/doc/bosTau7.txt
  • lines changed 66, context: html, text, full: html, text
    LASTZ dolphin turTru2 vs cow bosTau7.
  • lines changed 1, context: html, text, full: html, text
    Finished LASTZ dog canFam3 vs cow bosTau6.
• src/hg/makeDb/doc/canFam3.txt
  • lines changed 60, context: html, text, full: html, text
    Finished LASTZ dog canFam3 vs cow bosTau6.
• src/hg/makeDb/doc/echTel1.txt
  • lines changed 5, context: html, text, full: html, text
    reload without all_mrna
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlShortRnaSeq.release3.notes
  • lines changed 279, context: html, text, full: html, text
    updating notes file
  • lines changed 692, context: html, text, full: html, text
    updating notes file for cshl short
• src/hg/makeDb/doc/encodeDccMm9/wgEncodeFsuRepliChip.release1.notes
  • lines changed 207, context: html, text, full: html, text
    Added release notes for first release of track. Redmine #6627.
• src/hg/makeDb/doc/encodeDccMm9/wgEncodeUwRnaSeq.release1.notes
  • lines changed 679, context: html, text, full: html, text
    create note file
• src/hg/makeDb/doc/hg19.txt
  • lines changed 51, context: html, text, full: html, text
    completed rn5 chain net
  • lines changed 62, context: html, text, full: html, text
    starting echTel1 lastz
• src/hg/makeDb/doc/mm10.txt
  • lines changed 932, context: html, text, full: html, text
    completed phastCons and phyloP tracks for the 60-way
  • lines changed 62, context: html, text, full: html, text
    Finished LASTZ mm10 vs bosTau6.
• src/hg/makeDb/doc/rn5.txt
  • lines changed 19, context: html, text, full: html, text
    chain net to hg19 done
• src/hg/makeDb/doc/turTru2.txt
  • lines changed 28, context: html, text, full: html, text
    LASTZ dolphin turTru2 vs cow bosTau7.
• src/hg/makeDb/genbank/etc/genbank.conf
  • lines changed 2, context: html, text, full: html, text
    turn off genbank.mrna.native for echTel1
• src/hg/makeDb/genbank/etc/hgwbeta.dbs
  • lines changed 1, context: html, text, full: html, text
    added new sarHar1 assembly
  • lines changed 1, context: html, text, full: html, text
    Added echTel1 (redmine #7671)
• src/hg/makeDb/genbank/etc/rr.dbs
  • lines changed 1, context: html, text, full: html, text
    Added echTel1 (redmine #7671)
• src/hg/makeDb/trackDb/baboon/papAnu1/description.html
  • lines changed 62, context: html, text, full: html, text
    Initial descriptions for papAnu1.
• src/hg/makeDb/trackDb/baboon/papAnu1/gap.html
  • lines changed 64, context: html, text, full: html, text
    Initial descriptions for papAnu1.
• src/hg/makeDb/trackDb/baboon/papAnu1/gold.html
  • lines changed 23, context: html, text, full: html, text
    Initial descriptions for papAnu1.
• src/hg/makeDb/trackDb/baboon/papAnu1/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    Initial descriptions for papAnu1.
• src/hg/makeDb/trackDb/baboon/papHam1/description.html
  • lines changed 1, context: html, text, full: html, text
    Rename Papio_anubias.jpg to Papio_hamadryas_anubis.jpg to avoid conflict with papAnu1.
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 324, context: html, text, full: html, text
    Registering new cell lines
  • lines changed 1, context: html, text, full: html, text
    Fixed biochain broken link.
  • lines changed 17, context: html, text, full: html, text
    Adding cell line RCC_7860 to CV
  • lines changed 15, context: html, text, full: html, text
    Fixed orderurl for LICR lab to be contected to the correct lab.
  • lines changed 4, context: html, text, full: html, text
    Updating Lung cell type details in CV
  • lines changed 1, context: html, text, full: html, text
    Fixing a bug in the CV
  • lines changed 3, context: html, text, full: html, text
    Adding new vendor IDs for cell lines
  • lines changed 266, context: html, text, full: html, text
    Registering cell lines in CV
  • lines changed 4, context: html, text, full: html, text
    Changing a couple of cell type details
  • lines changed 2, context: html, text, full: html, text
    Updating cell type name in CV
• src/hg/makeDb/trackDb/cv/public/cv.ra
  • lines changed 1, context: html, text, full: html, text
    Fixed biochain broken link.
• src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    SNP131 trakc added. Set it to appear on by default.
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 855, context: html, text, full: html, text
    adding it in again
  • lines changed 359, context: html, text, full: html, text
    added last cshl short tracks
  • lines changed 1319, context: html, text, full: html, text
    Adding protocols and dccAccessions
  • lines changed 1476, context: html, text, full: html, text
    adding in new cshl short tracks
  • lines changed 415, context: html, text, full: html, text
    Fixing merge conflict
  • lines changed 178, context: html, text, full: html, text
    added in md5sums
  • lines changed 136, context: html, text, full: html, text
    fixing old conflict, new md5sums, and added accessions and expId
  • lines changed 173, context: html, text, full: html, text
    removing alignments from view, and correcting defaults
  • lines changed 5, context: html, text, full: html, text
    fixed overlapping attic and objStatus replaced
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra
  • lines changed 560, context: html, text, full: html, text
    adding in new open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra
  • lines changed 2397, context: html, text, full: html, text
    added in new sydh tracks
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUmassDekker5C.ra
  • lines changed 401, context: html, text, full: html, text
    Added release 2 updates for track. Redmine #8071.
  • lines changed 63, context: html, text, full: html, text
    Added dccAccession's and md5sum's for files. Redmine #8071.
• src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeCshlShortRnaSeq.ra
  • lines changed 20597, context: html, text, full: html, text
    Staging Cold Springs Harbor Lab Short RNA Seq (Release 3) RM#5556
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    Renamed path of track to be release 2 of track. Redmine #8071.
  • lines changed 2, context: html, text, full: html, text
    Staging Cold Springs Harbor Lab Short RNA Seq (Release 3) RM#5556
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release2.html
  • lines changed 9, context: html, text, full: html, text
    Removing references to Alignment views because they were dropped from Release 2 because hgnfs1 filled up RM#5556
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.html
  • lines changed 1, context: html, text, full: html, text
    qa fixes to html
  • lines changed 15, context: html, text, full: html, text
    qa html fixes
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra
  • lines changed 96, context: html, text, full: html, text
    added last cshl short tracks
  • lines changed 49, context: html, text, full: html, text
    adding in new cshl short tracks
  • lines changed 1, context: html, text, full: html, text
    Adding rank label
  • lines changed 135, context: html, text, full: html, text
    fixed short and long labels
  • lines changed 1594, context: html, text, full: html, text
    removing alignments from view, and correcting defaults
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra
  • lines changed 104, context: html, text, full: html, text
    adding in new open chrom dnase tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.release3.ra
  • lines changed 722, context: html, text, full: html, text
    changed cell tier tags and correct treatment labels
  • lines changed 320, context: html, text, full: html, text
    added in new sydh tracks
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.patch.html
  • lines changed 212, context: html, text, full: html, text
    Renamed path of track to be release 2 of track. Redmine #8071.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.patch.ra
  • lines changed 59, context: html, text, full: html, text
    Renamed path of track to be release 2 of track. Redmine #8071.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.html
  • lines changed 212, context: html, text, full: html, text
    Renamed path of track to be release 2 of track. Redmine #8071.
  • lines changed 4, context: html, text, full: html, text
    Added release 2 updates for track. Redmine #8071.
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.ra
  • lines changed 59, context: html, text, full: html, text
    Renamed path of track to be release 2 of track. Redmine #8071.
  • lines changed 50, context: html, text, full: html, text
    Added release 2 updates for track. Redmine #8071.
  • lines changed 5, context: html, text, full: html, text
    Fixed tag's of tier cell's to be t<tier number> instead of alphabetically.
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    Added papAnu1 to DBS.
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeFsuRepliChip.ra
  • lines changed 4, context: html, text, full: html, text
    Fixed truncated file. Redmine #6627.
  • lines changed 2, context: html, text, full: html, text
    Updated md5sum's. Redmine #6627.
  • lines changed 157, context: html, text, full: html, text
    Added dccAccessions and expId's. Also added last remaning raw data file. Redmine #6627.
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra
  • lines changed 153, context: html, text, full: html, text
    update after running encodeMkFilesList for V2 files
  • lines changed 1873, context: html, text, full: html, text
    update with new submissions in the past week
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra
  • lines changed 36, context: html, text, full: html, text
    update after running encodeMkFilesList for V2 files
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeUwRnaSeq.ra
  • lines changed 431, context: html, text, full: html, text
    add new expId, accession
  • lines changed 36, context: html, text, full: html, text
    removing files tables whose names has been changed, see note 28,29 #4469
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/makefile
  • lines changed 1, context: html, text, full: html, text
    Staging FSU Replication Timing (Release 1) on beta (redmine #6627)
  • lines changed 1, context: html, text, full: html, text
    Staging UW RNA-Seq (Release 1) on beta (redmine #4469)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeFsuRepliChip.ra
  • lines changed 1724, context: html, text, full: html, text
    Staging FSU Replication Timing (Release 1) on beta (redmine #6627)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeLicrHistone.ra
  • lines changed 23, context: html, text, full: html, text
    moving objStatus for mm9 Licr labs over to beta
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeLicrTfbs.ra
  • lines changed 30, context: html, text, full: html, text
    moving objStatus for mm9 Licr labs over to beta
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeUwRnaSeq.ra
  • lines changed 6123, context: html, text, full: html, text
    Staging UW RNA-Seq (Release 1) on beta (redmine #4469)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/#wgEncodeMapability.ra#
  • lines changed 106, context: html, text, full: html, text
    deleting weird back-up copy of file that was accidentally checked in
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeCshlLongRnaSeq.ra
  • lines changed 3249, context: html, text, full: html, text
    Staging Long RNA-seq ENCODE/Cold Springs Harbor Lab on public (Release2) RM#7089
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeLicrHistone.ra
  • lines changed 23, context: html, text, full: html, text
    pushing out objStatus change for mm9 LICR TFBS & LICR Histone because files had errors, redmine 8343
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeLicrTfbs.ra
  • lines changed 3, context: html, text, full: html, text
    moving objStatus for mm9 Licr labs over to beta
  • lines changed 27, context: html, text, full: html, text
    pushing out objStatus change for mm9 LICR TFBS & LICR Histone because files had errors, redmine 8343
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra
  • lines changed 2, context: html, text, full: html, text
    Staging Long RNA-seq ENCODE/Cold Springs Harbor Lab on public (Release2) RM#7089
  • lines changed 1, context: html, text, full: html, text
    Staging UW RNA-Seq (Release 1) on beta (redmine #4469)
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCshlLongRnaSeq.release2.html
  • lines changed 6, context: html, text, full: html, text
    Fixed for Redmine #7089
    1. Changed "RNAs > 200" to "RNAs greater than 200".
    
    2. Unitalicized "i.e." under Alignments view configuration
    
    3. Changed "mapped against hg19" to "mapped against mm9".
    
    4. Changed "values > 0.90" to "values greater than 0.90".
    
    5. Made the words "element data views" a hyperlink in the release notes.
    
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.html
  • lines changed 18, context: html, text, full: html, text
    Updated html page, with suggestion from QA from Human release. Redmine #6627.
  • lines changed 43, context: html, text, full: html, text
    Fixes for QA in Redmine #6627
    1. Forced ording in subtrack list to be EpiSC-5 and EpiSC-7 should come before ES cells
    2. Fixed misspelling of Enoderm
    3. Added spaces between values and units for days (9 d)
    5. Change "human genome" and "mouse genome"
    7. Added comma after i.e.
    8. Added comma after i.e.
    9. Changed "autocorrelation" -> "auto-correlation"
    10. Alphabetized References section
    
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra
  • lines changed 2, context: html, text, full: html, text
    Fixed truncated file. Redmine #6627.
  • lines changed 67, context: html, text, full: html, text
    Updated long and short labels. This is a trial. Redmine #6627.
  • lines changed 9, context: html, text, full: html, text
    Updated labels. Redmine #6627.
  • lines changed 26, context: html, text, full: html, text
    Added 3 missing table references. Redmine #6627.
  • lines changed 8, context: html, text, full: html, text
    Fixes for QA in Redmine #6627
    1. Forced ording in subtrack list to be EpiSC-5 and EpiSC-7 should come before ES cells
    2. Fixed misspelling of Enoderm
    3. Added spaces between values and units for days (9 d)
    5. Change "human genome" and "mouse genome"
    7. Added comma after i.e.
    8. Added comma after i.e.
    9. Changed "autocorrelation" -> "auto-correlation"
    10. Alphabetized References section
    
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release3.ra
  • lines changed 219, context: html, text, full: html, text
    update with new submissions in the past week
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html
  • lines changed 25, context: html, text, full: html, text
    update description
  • lines changed 5, context: html, text, full: html, text
    clean up description
  • lines changed 2, context: html, text, full: html, text
    clean up descriptions
  • lines changed 1, context: html, text, full: html, text
    clean up descriptions
  • lines changed 0, context: html, text, full: html, text
    clean up space
  • lines changed 24, context: html, text, full: html, text
    added references
  • lines changed 7, context: html, text, full: html, text
    added release note
• src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra
  • lines changed 64, context: html, text, full: html, text
    unify liver short label, different age, strain, type of view
  • lines changed 102, context: html, text, full: html, text
    clean up short labels
  • lines changed 3, context: html, text, full: html, text
    fix short labels
  • lines changed 23, context: html, text, full: html, text
    clean up long labels with old conventions
  • lines changed 157, context: html, text, full: html, text
    clean up long labels, still have some rounds to go
  • lines changed 1, context: html, text, full: html, text
    clean up longLabels
  • lines changed 8, context: html, text, full: html, text
    clean up long labels
  • lines changed 2, context: html, text, full: html, text
    remove RNA extract and localization form file sort order
  • lines changed 1, context: html, text, full: html, text
    add strain in fileSortOrder
  • lines changed 1, context: html, text, full: html, text
    clean up cell matrix labels
  • lines changed 11, context: html, text, full: html, text
    clean up long labels
  • lines changed 1, context: html, text, full: html, text
    clean up vew box labels
  • lines changed 42, context: html, text, full: html, text
    set default setting for views and subtracks
  • lines changed 1, context: html, text, full: html, text
    add html entry
  • lines changed 17, context: html, text, full: html, text
    fix duplicate long labels
• src/hg/makeDb/trackDb/tenrec/echTel1/trackDb.ra
  • lines changed 2, context: html, text, full: html, text
    Changed visibility settings (redmine #7671)
  • lines changed 1, context: html, text, full: html, text
    Changed visibility mode for Other RefSeq back to pack (redmine #7671)
• src/hg/utils/automation/HgAutomate.pm
  • lines changed 3, context: html, text, full: html, text
    eliminate memk from list of cluster checks
• src/hg/utils/automation/configFiles/papAnu1.config.ra
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    Rename genome name from Olive baboon to Baboon for papAnu1.
• src/product/README.install
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    eliminate ex.hgcentral.sql and references to it
• src/product/ex.hg.conf
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    Add example to enable hgLogin.
• src/product/ex.hgcentral.sql
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    eliminate ex.hgcentral.sql and references to it
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    v270 preview1

• lines changed: 53734
• files changed: 169