File Changes for galt

v286_base to v287_preview (2013-07-09 to 2013-07-16) v287

• src/hg/encode3/validateManifest/makefile
  • lines changed 2, context: html, text, full: html, text
    this has changes for 1.6 (except still need to add types IDAT,RCC,unknown)
• src/hg/encode3/validateManifest/validateManifest.c
  • lines changed 27, context: html, text, full: html, text
    this has changes for 1.6 (except still need to add types IDAT,RCC,unknown)
  • lines changed 34, context: html, text, full: html, text
    adding types idat and rcc which just check for fileSize > 0
• src/hg/hgc/hgc.c
  • lines changed 3, context: html, text, full: html, text
    fixing oops somebody made losing my changes.
• src/hg/utils/makefile
  • lines changed 2, context: html, text, full: html, text
    adding mysqlSecurityCheck to makefile
• src/hg/utils/mysqlSecurityCheck/makefile
  • lines changed 14, context: html, text, full: html, text
    Initial commit of new utility mysqlSecurityCheck which can be used to make sure that CGI mysql users do not have access to the mysql meta database where the mysql.user.password values must be protected from hacking.
• src/hg/utils/mysqlSecurityCheck/mysqlSecurityCheck.c
  • lines changed 254, context: html, text, full: html, text
    Initial commit of new utility mysqlSecurityCheck which can be used to make sure that CGI mysql users do not have access to the mysql meta database where the mysql.user.password values must be protected from hacking.
  • lines changed 5, context: html, text, full: html, text
    some little improvements to mysqlSecurityCheck output
• src/lib/errabort.c
  • lines changed 44, context: html, text, full: html, text
    Fixing multi-threaded race condition in errAbort.c on pidInUse by adding another mutex.
  • lines changed 1, context: html, text, full: html, text
    make sure that the rlimit out of memory errAbort still works
  • lines changed 1, context: html, text, full: html, text
    After discussing with Angie, its probably OK to allow atexit cleanup
• src/lib/tests/makefile
  • lines changed 5, context: html, text, full: html, text
    make sure that the rlimit out of memory errAbort still works
• src/lib/tests/testOutOfMem.c
  • lines changed 65, context: html, text, full: html, text
    make sure that the rlimit out of memory errAbort still works