File Changes for kate

v295_base to v296_preview (2014-02-03 to 2014-02-10) v296

• src/hg/hgTrackUi/hgTrackUi.c
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    Changes from code review.
• src/hg/hgTracks/factorSource.c
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    Support multiple canonical motifs for a TF. Also simplify hgc code for motifs. refs #9092
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    Merge branch
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    Comment as requested in code review
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    Remove direction arrows in dense mode. Agreeing with Brian's suggest during code review that it's busy and problematic if overlaps are on both directions. refs #9092
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    Changes from code review.
• src/hg/hgc/hgc.c
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    Merge branch
• src/hg/hgc/peakClusters.c
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    Support multiple canonical motifs for a TF. Also simplify hgc code for motifs. refs #9092
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    Fix problem with missing Description section (occured when factor is missing from motifTarget table. refs #9092
• src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html
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    Additional settings for motifs in factorSource tracks. refs #9092
• src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
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    Additional settings for motifs in factorSource tracks. refs #9092
• src/hg/lib/factorMotifs.as
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    Schema for TF to motif table (e.g. factorbookMotifTarget). refs #9092
• src/hg/makeDb/schema/all.joiner
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    Linked tables for TF ChIP V4 track. refs #12551
• src/hg/makeDb/trackDb/human/hg19/wgEncodeReg.ra
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    Support multiple canonical motifs for a TF. Also simplify hgc code for motifs. refs #9092
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    Merge branch
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    Add missing TF factors to filter. refs #12551
• src/hg/makeDb/trackDb/human/hg19/wgEncodeRegTfbsClusteredV3.html
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    Clarifications and minor additions to TF ChIP V4 track description after review by ZLab (Zhiping Weng). refs #12551
• src/hg/makeDb/trackDb/tagTypes.tab
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    Merge branch