Commits for angie
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v314_preview2 to v314_base (2015-03-23 to 2015-03-30) v314
- Warn user if they're about to clobber a session due to MySQL/latin1's case insensitivity.
Thanks b0b for finding that!
fixes #15051
- src/hg/hgSession/hgSession.c - lines changed 12, context: html, text, full: html, text
- Code review feedback from Kate: libify inclusion of libs for new React framework.
refs #14965
- src/hg/hgChooseDb/hgChooseDb.c - lines changed 16, context: html, text, full: html, text
- src/hg/hgIntegrator/hgIntegrator.c - lines changed 18, context: html, text, full: html, text
- Code review feedback from Kate: clarify comment.
refs #14965
- src/hg/js/react/lib/LabeledSelect.jsx - lines changed 3, context: html, text, full: html, text
- Code review feedback from Kate: DRY
refs #14965
- src/hg/js/model/hgIntegrator/hgIntegratorModel.js - lines changed 5, context: html, text, full: html, text
- In a genome-wide query, bed2GffLines is called once per assembly sequence;
for scaffold-based assemblies, it can be called hundreds of thousands of times.
When called on a very small table with rows for relatively few sequences, it
may be called tens of thousands of times without producing any output.
Combined with the inefficiency of allocating a sizeable hash regardless
of whether it had any items to work on, the long delays were causing
web timeouts. Now, if there are no incoming items, it returns immediately.
There are still some delays from the hundreds of thousands of queries that
return no data, but they are manageable (~45s for ~200k scaffolds).
refs #15043
- src/hg/hgTables/gffOut.c - lines changed 2, context: html, text, full: html, text
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