Commits for braney

v316_preview to v316_preview2 (2015-04-27 to 2015-05-04) v316

• don't pay attention to mate pos information if it's on a different chrom
  refs #15248
  
  • src/hg/hgTracks/bamTrack.c - lines changed 2, context: html, text, full: html, text
• collect CDS frame information for Gencode knownGene refs #14639
  
  • src/hg/hgTracks/simpleTracks.c - lines changed 40, context: html, text, full: html, text
  • src/hg/lib/knownCds.as - lines changed 10, context: html, text, full: html, text
  • src/hg/lib/knownCds.sql - lines changed 15, context: html, text, full: html, text
• build instructions for Gencode UCSC genes #14639
  
  • src/hg/makeDb/doc/ucscGenes/hg38.ucscGenes16.sh - lines changed 269, context: html, text, full: html, text