Commits for ceisenhart

v317_preview to v317_preview2 (2015-05-18 to 2015-05-25) v317

• Some minor refactoring to make the .json files smaller
  
  • src/tagStorm/tagStormToJson/tagStormToJson.c - lines changed 12, context: html, text, full: html, text
• Added warning and error messages for bad inputs
  
  • src/tagStorm/jsonToTagStorm/jsonToTagStorm.c - lines changed 10, context: html, text, full: html, text
• A shell script that Hiram gave me, runs a program and compares the error to a text file. Good for testing.
  
  • src/tagStorm/jsonToTagStorm/errCheck.sh - lines changed 41, context: html, text, full: html, text
• Working on some cirm tag verifcation for Jim
  
  • src/hg/cirm/cdw/cirmTags/cirmTags.c - lines changed 79, context: html, text, full: html, text
  • src/hg/cirm/cdw/cirmTags/makefile - lines changed 3, context: html, text, full: html, text
• This code runs on a Excel file (.xlsx) t
  
  • src/hg/cirm/cdw/cirmTags/cirmTags.c - lines changed 14, context: html, text, full: html, text
• Some basic notes about the assignment, I am piping stats directly into the file, and worry it will be overwritten. Hence, git
  
  • cirmNotes.txt - lines changed 18, context: html, text, full: html, text
• Changed the graph generation a bit, now the nodes are weighted based on children
  
  • src/hg/expData/expData.c - lines changed 465, context: html, text, full: html, text
  • src/hg/expData/forceLayout.json - lines changed 247, context: html, text, full: html, text
  • src/hg/expData/makefile - lines changed 3, context: html, text, full: html, text
  • src/hg/expData/radialDend.html - lines changed 109, context: html, text, full: html, text
  • src/hg/expMatrixToJson/expData.c - lines changed 465, context: html, text, full: html, text
  • src/hg/expMatrixToJson/expMatrixToJson.c - lines changed 499, context: html, text, full: html, text
  • src/hg/expMatrixToJson/forceLayout.json - lines changed 247, context: html, text, full: html, text
  • src/hg/expMatrixToJson/makefile - lines changed 3, context: html, text, full: html, text
  • src/hg/expMatrixToJson/radialDend.html - lines changed 109, context: html, text, full: html, text
• The binary tree is now a weighted binary tree
  
  • src/hg/expMatrixToJson/expMatrixToJson.c - lines changed 11, context: html, text, full: html, text
• REFS #15377 fixing an issue with the usage statement
  
  • src/utils/bigWigCluster/bigWigCluster.c - lines changed 2, context: html, text, full: html, text
• Merge branch 'expGraphs'