All File Changes

v320_base to v321_preview (2015-08-03 to 2015-08-21) v321

• src/hg/hgGene/hgGeneData/Human/hg19/links.ra
  • lines changed 6, context: html, text, full: html, text
    Add hgGene links to GTEx gene pages. These should be revised once GTEx tables are loaded (can be made more accurate then). refs #15649
    
• src/hg/hgGene/hgGeneData/Human/hg38/links.ra
  • lines changed 8, context: html, text, full: html, text
    Add hgGene links to GTEx gene pages. These should be revised once GTEx tables are loaded (can be made more accurate then). refs #15649
    
  • lines changed 1, context: html, text, full: html, text
    Use gene symbol for GTEx portal links for hg38, since the ENSG versions have diverged a bit between V18 and V22 of GENCODE. refs #15649
    
• src/hg/hgGene/hgGeneData/Human/links.ra
  • lines changed 7, context: html, text, full: html, text
    Add link to GTEX (Genotype Tissue Expression) gene page. refs #15649
    
  • lines changed 1, context: html, text, full: html, text
    More work on gene links. refs #15649
    
• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 2, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/hgTracks/bigBedTrack.c
  • lines changed 8, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
  • lines changed 32, context: html, text, full: html, text
    do a better job of bigPsl support (query gaps) #14241
    
  • lines changed 2, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/hg/hgTracks/cds.c
  • lines changed 5, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/hgTracks/hgTracks.c
  • lines changed 5, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/hgTracks/hgTracks.h
  • lines changed 1, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/hgTracks/mafTrack.c
  • lines changed 2, context: html, text, full: html, text
    some tweaks to introduce mafSnp mode to hg38 100way #14277
    
• src/hg/hgTracks/mafTrack.h
  • lines changed 9, context: html, text, full: html, text
    some tweaks to introduce mafSnp mode to hg38 100way #14277
    
• src/hg/hgTracks/simpleTracks.c
  • lines changed 9, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/hgTracks/wigMafTrack.c
  • lines changed 13, context: html, text, full: html, text
    some tweaks to introduce mafSnp mode to hg38 100way #14277
    
• src/hg/hgVai/hgVai.c
  • lines changed 1, context: html, text, full: html, text
    Doh, wgEncodeRegDnaseClusteredV3 is out on the RR and wgEncodeRegDnaseClusteredV2
    is not, so hgVai wasn't showing a DNase option.
    TODO: use the new columns in wgEncodeRegDnaseClusteredV3 to support filtering
    by cell type.
    
  • lines changed 17, context: html, text, full: html, text
    Account for different regulatory track table names in hg19 vs hg38. Really we need .ra's for this.
    
• src/hg/hgc/bigBedClick.c
  • lines changed 2, context: html, text, full: html, text
    allowing empty name fields in bigBed. refs #15780
    
• src/hg/hgc/hgc.c
  • lines changed 46, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
  • lines changed 1, context: html, text, full: html, text
    small bigPsl fix #14241
    
  • lines changed 75, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/hg/hgsql/hgsql.c
  • lines changed 2, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
• src/hg/inc/bigPsl.h
  • lines changed 88, context: html, text, full: html, text
    left out bigPsl.c in my earlier bigPsl check in. #14241
    
• src/hg/inc/jksql.h
  • lines changed 25, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
  • lines changed 3, context: html, text, full: html, text
    adding setting HGDB_PROF which can over-ride the default profile value of "db" for any utility using jksql.
    
• src/hg/js/ajax.js
  • lines changed 2, context: html, text, full: html, text
    fix regex for hgsid to match current hgsid format (now
    number_alphanumber whereas it used to just be a number ) #15820
    
• src/hg/lib/bigPsl.as
  • lines changed 6, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/lib/bigPsl.c
  • lines changed 336, context: html, text, full: html, text
    left out bigPsl.c in my earlier bigPsl check in. #14241
    
  • lines changed 7, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/hg/lib/ensGtp.sql
  • lines changed 2, context: html, text, full: html, text
    ensGene names can be up to 21 characters refs #15796
    
  • lines changed 2, context: html, text, full: html, text
    ensGene names can be up to 21 characters refs #15796
    
• src/hg/lib/genePred.c
  • lines changed 25, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 7, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/lib/hgFind.c
  • lines changed 11, context: html, text, full: html, text
    Fixes bugs related to RM#15751
    
• src/hg/lib/hui.c
  • lines changed 1, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/lib/jksql.c
  • lines changed 234, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
  • lines changed 83, context: html, text, full: html, text
    adding ssl params crl and crlPath. also more cleanup, got rid of a separate function sqlProfileNew() since it was no longer needed.
    
  • lines changed 10, context: html, text, full: html, text
    adding db field to sqlProfile just in case it is useful.
    
  • lines changed 1, context: html, text, full: html, text
    oops
    
  • lines changed 16, context: html, text, full: html, text
    adding setting HGDB_PROF which can over-ride the default profile value of "db" for any utility using jksql.
    
• src/hg/lib/makefile
  • lines changed 1, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/lib/sqlProg.c
  • lines changed 17, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
  • lines changed 5, context: html, text, full: html, text
    Added -profile=<profileName> option to hg/lib/sqlProg.c
    so now all of the hgsql-family of utils can login via
    ANY profile in their hg.conf. Seems to work quite well.
    Might be a lot easier in many cases to add a new profile
    to the existing ~/.hg.conf, instead of trying to use
    environment vars to point to some other hg.conf file.
    
  • lines changed 1, context: html, text, full: html, text
    allow hgsql to use HGDB_PROF env setting to override default profile
    
• src/hg/lib/tests/makefile
  • lines changed 1, context: html, text, full: html, text
    Hook annoGratorTest into top-level test target.
    
• src/hg/lib/trackDbCustom.c
  • lines changed 1, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/lib/trackHub.c
  • lines changed 1, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/lib/wikiLink.c
  • lines changed 1, context: html, text, full: html, text
    Fixed typo that caused hgSession's "Sign out" link to go instead to
    a sign in page, while not really signing out the user - HT Jonathan.
    fixes #15217
    
• src/hg/makeDb/doc/ci3/initialBuild.txt
  • lines changed 648, context: html, text, full: html, text
    adding ci3 to correspond with Ensembl v81 release refs #15796
    
• src/hg/makeDb/doc/ci3/ucscCompositeAgp.pl
  • lines changed 62, context: html, text, full: html, text
    adding ci3 to correspond with Ensembl v81 release refs #15796
    
• src/hg/makeDb/doc/ci3/unplaced.pl
  • lines changed 48, context: html, text, full: html, text
    adding ci3 to correspond with Ensembl v81 release refs #15796
    
• src/hg/makeDb/doc/gtex/2014-jan.txt
  • lines changed 25, context: html, text, full: html, text
    More work on gene links. refs #15649
    
• src/hg/makeDb/doc/hg38/hg18MassiveLift.txt
  • lines changed 50, context: html, text, full: html, text
    Documentation for the fosEndPair and fishClones hg18->hg38 lift
    
• src/hg/makeDb/genbank/src/ccds/ccdsImport.c
  • lines changed 1, context: html, text, full: html, text
    adding setting HGDB_PROF which can over-ride the default profile value of "db" for any utility using jksql.
    
• src/hg/makeDb/schema/dbSnoop/dbSnoop.c
  • lines changed 6, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
  • lines changed 26, context: html, text, full: html, text
    adding -profile option to dbSnoop
    
  • lines changed 1, context: html, text, full: html, text
    adding setting HGDB_PROF which can over-ride the default profile value of "db" for any utility using jksql.
    
• src/hg/makeDb/trackDb/human/dgvPlus.html
  • lines changed 21, context: html, text, full: html, text
    Update reference format ahead of DGV track update, refs #15767
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV10.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV11.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV12.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV13.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV14.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV15.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV16.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV17.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV18.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV19.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV7.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV9.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg38/trackDb.ra
  • lines changed 37, context: html, text, full: html, text
    a couple of test tracks using bigPsl #14241
    
  • lines changed 8, context: html, text, full: html, text
    Added two hg18->hg38 lift stanzas, fishClones, and fosEndPairs
    
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV19.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV20.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV21.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV22.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/makefile
  • lines changed 1, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
• src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM2.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM3.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/mouse/mm10/wgEncodeGencodeVM4.ra
  • lines changed 1, context: html, text, full: html, text
    Fixing typo in wgEncodeGencode*View2Way: view is b2-way not 42-Way.
    
• src/hg/makeDb/trackDb/squirt/ci3/description.html
  • lines changed 63, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
• src/hg/makeDb/trackDb/squirt/ci3/gap.html
  • lines changed 30, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
• src/hg/makeDb/trackDb/squirt/ci3/gold.html
  • lines changed 34, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
• src/hg/makeDb/trackDb/squirt/ci3/trackDb.ra
  • lines changed 8, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
  • lines changed 5, context: html, text, full: html, text
    adding search rule for gold table refs #15796
    
• src/hg/makeDb/trackDb/tagTypes.tab
  • lines changed 35, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/mrnaToGene/tests/expected/allCds.gp
  • lines changed 7, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 7, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/base.gp
  • lines changed 7, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 7, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/cds3GapMerge.gp
  • lines changed 5, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 3, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/frame.gp
  • lines changed 7, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 7, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/gapMerge.gp
  • lines changed 4, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 3, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/noCds.gp
  • lines changed 7, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 7, context: html, text, full: html, text
    fixed problem with previous change to deal with query inserts #15803
    
• src/hg/mrnaToGene/tests/expected/noGapMerge.gp
  • lines changed 1, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
• src/hg/mrnaToGene/tests/expected/trans.gp
  • lines changed 1, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
• src/hg/mrnaToGene/tests/input/gaps.cds
  • lines changed 1, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
• src/hg/mrnaToGene/tests/input/gaps.psl
  • lines changed 2, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
• src/hg/utils/automation/EnsGeneAutomate.pm
  • lines changed 3, context: html, text, full: html, text
    actually on chlSab2 instead of chlSab1 refs #15796
    
  • lines changed 3, context: html, text, full: html, text
    actually dm6 in v81 instead of dm3 refs #15796
    
• src/hg/utils/automation/doEnsGeneUpdate.pl
  • lines changed 4, context: html, text, full: html, text
    now using -includeVersion for gtfToGenePred and subsequent correct name matching from gene to protein refs #15796
    
• src/hg/utils/automation/findEnsFtpNames.sh
  • lines changed 3, context: html, text, full: html, text
    more correct parsing of FTP site listing refs #15796
    
• src/hg/utils/automation/makeGenomeDb.pl
  • lines changed 1, context: html, text, full: html, text
    adding ci3 to match Ensembl releases refs #15796
    
• src/hg/utils/bigPslToPsl/bigPslToPsl.c
  • lines changed 61, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/hg/utils/bigPslToPsl/makefile
  • lines changed 3, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/hg/utils/gff3ToPsl/gff3ToPsl.c
  • lines changed 22, context: html, text, full: html, text
    Fixed with psl to genePred frame correction working when there
    is target deletion. A lot of test cases changed as they
    were constructed from transMap and so had a lot of indels. (#15803)
    
  • lines changed 5, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
  • lines changed 1, context: html, text, full: html, text
    fixed invalid check for empty string detected by newer gcc (no redmine)
    
• src/hg/utils/gff3ToPsl/tests/expected/grch38ToGrch37Test.psl
  • lines changed 20, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/hg/utils/gff3ToPsl/tests/input/GRCh37.p13.sizes
  • lines changed 1, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/hg/utils/gff3ToPsl/tests/input/GRCh38.p2-GRCh37.p13.gff
  • lines changed 25, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/hg/utils/gff3ToPsl/tests/input/GRCh38.p2.sizes
  • lines changed 6, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/hg/utils/gff3ToPsl/tests/makefile
  • lines changed 6, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/hg/utils/pslToBigPsl/makefile
  • lines changed 4, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
• src/hg/utils/pslToBigPsl/pslToBigPsl.c
  • lines changed 289, context: html, text, full: html, text
    first cut at bigPsl support in the browser. #14241
    
  • lines changed 5, context: html, text, full: html, text
    more polish for bigPsl support. hgc alignments work now #14241
    
• src/inc/common.h
  • lines changed 5, context: html, text, full: html, text
    allowing empty name fields in bigBed. refs #15780
    
• src/lib/annoStreamBigWig.c
  • lines changed 11, context: html, text, full: html, text
    Fixed a bug that caused us to quit after the first chrom in whole-genome mode.
    That required using a different method to tell when we're done querying for
    region mode.
    fixes #15813
    
• src/lib/basicBed.c
  • lines changed 1, context: html, text, full: html, text
    increase a number that causes beds with more than 1024 blocks to not
    validate, even though they work fine after validation #14241
    
• src/lib/common.c
  • lines changed 14, context: html, text, full: html, text
    allowing empty name fields in bigBed. refs #15780
    
  • lines changed 1, context: html, text, full: html, text
    Initial check-in for Add-SSL-Support-Options to jksql.c and to hgsql-and-family functions.
    
• src/lib/psl.c
  • lines changed 5, context: html, text, full: html, text
    convert asserts to errAborts to help debug bogus GFF3 alignments (no redmine)
    
  • lines changed 15, context: html, text, full: html, text
    fixed bug converting GFF3 alignments to PSL when alignments started or ended with indels (no redmine)
    
• src/product/README.mysql.setup
  • lines changed 141, context: html, text, full: html, text
    adding documentation for the new SSL settings in hg.conf, and configuring mysql for SSL connections to the database.
    
• src/utils/qa/weeklybld/buildEnv.csh
  • lines changed 2, context: html, text, full: html, text
    v321 preview1 refs #15836
    
• src/utils/qa/weeklybld/cherryPickCommits.csh
  • lines changed 1, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    
• src/utils/qa/weeklybld/doNewBranch.csh
  • lines changed 1, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    
• src/utils/qa/weeklybld/doSearchRobot.csh
  • lines changed 2, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    
• src/utils/qa/weeklybld/moveBranchTag.csh
  • lines changed 1, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    
• src/utils/qa/weeklybld/patchBranch.csh
  • lines changed 1, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    
• src/utils/qa/weeklybld/revertCommits.csh
  • lines changed 1, context: html, text, full: html, text
    updated email addresses to proper at soe.ucsc.edu refs #15731
    

• lines changed: 3010
• files changed: 136