File Changes for kate

v328_preview2 to v328_base (2016-01-25 to 2016-02-08) v328

• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 3, context: html, text, full: html, text
    Cosmetics on GTEx Gene trackUI page, with special effort to fit tissue table in popup dialog without scrolling.
    
  • lines changed 1, context: html, text, full: html, text
    Tweak font size of title
    
• src/hg/hgTracks/gtexTracks.c
  • lines changed 4, context: html, text, full: html, text
    Remove rainbow color scheme option. It would require noticeable work to implement fully (e.g. for tissue filter on trackUi and boxplot on hgc) and doesn't have an immediate use case. Leaving in the code as I can see there could be a need for alternate color schemes (e.g. distinct colors for brain). refs #15645
    
• src/hg/inc/gtexTissue.h
  • lines changed 3, context: html, text, full: html, text
    First cut sortable table to select tissues. refs #15645
    
• src/hg/js/hgTracks.js
  • lines changed 2, context: html, text, full: html, text
    Cosmetics on GTEx Gene trackUI page, with special effort to fit tissue table in popup dialog without scrolling.
    
  • lines changed 8, context: html, text, full: html, text
    Use gene name in GTEx geme right-click menus, even when moused over a tissue. refs #15645
    
  • lines changed 10, context: html, text, full: html, text
    Add apply button to UI popup dialog
    
  • lines changed 5, context: html, text, full: html, text
    Fixes to Apply button on hgTrackUi popup. Cosmetics on GTEx UI.
    
  • lines changed 9, context: html, text, full: html, text
    Fix broken parsing of Safari version, so image update (e.g. for drag-zoom) can be used when version supports it.
    
  • lines changed 11, context: html, text, full: html, text
    Merge branch 'master' into applyButtonBottom
    
  • lines changed 9, context: html, text, full: html, text
    Improvements to GTEx trackUI. Especially right-click menus and popup. refs #15645
    
  • lines changed 3, context: html, text, full: html, text
    Restore extTools default popup width. Tweak others a little.
    
• src/hg/js/utils.js
  • lines changed 3, context: html, text, full: html, text
    add 'noAltColors' class to sortable table to suppress alternating colored rows
    
  • lines changed 12, context: html, text, full: html, text
    Persist ordering in tissue table (using sortOrder cart var)
    
• src/hg/lib/gtexTissue.c
  • lines changed 22, context: html, text, full: html, text
    First cut sortable table to select tissues. refs #15645
    
• src/hg/lib/gtexUi.c
  • lines changed 130, context: html, text, full: html, text
    First cut sortable table to select tissues. refs #15645
    
  • lines changed 33, context: html, text, full: html, text
    Cosmetics (stop shouting ;-)
    
  • lines changed 4, context: html, text, full: html, text
    Fix HTML syntax err.
    
  • lines changed 3, context: html, text, full: html, text
    Minor style changes.
    
  • lines changed 22, context: html, text, full: html, text
    Persist ordering in tissue table (using sortOrder cart var)
    
  • lines changed 22, context: html, text, full: html, text
    Cleanup styling.
    
  • lines changed 2, context: html, text, full: html, text
    Remove rainbow color scheme option. It would require noticeable work to implement fully (e.g. for tissue filter on trackUi and boxplot on hgc) and doesn't have an immediate use case. Leaving in the code as I can see there could be a need for alternate color schemes (e.g. distinct colors for brain). refs #15645
    
  • lines changed 106, context: html, text, full: html, text
    Special handling of popup configuration for GTEx track (see RM #15873 for why). refs #155645
    
  • lines changed 28, context: html, text, full: html, text
    Cosmetics on GTEx Gene trackUI page, with special effort to fit tissue table in popup dialog without scrolling.
    
  • lines changed 26, context: html, text, full: html, text
    Fixes to Apply button on hgTrackUi popup. Cosmetics on GTEx UI.
    
• src/hg/makeDb/trackDb/human/trackDb.gtex.ra
  • lines changed 1, context: html, text, full: html, text
    Trimming long label a bit