Commits for kate

v328_preview2 to v328_base (2016-01-25 to 2016-02-08) v328

• add 'noAltColors' class to sortable table to suppress alternating colored rows
  
  • src/hg/js/utils.js - lines changed 3, context: html, text, full: html, text
• First cut sortable table to select tissues. refs #15645
  
  • src/hg/inc/gtexTissue.h - lines changed 3, context: html, text, full: html, text
  • src/hg/lib/gtexTissue.c - lines changed 22, context: html, text, full: html, text
  • src/hg/lib/gtexUi.c - lines changed 130, context: html, text, full: html, text
• Cosmetics (stop shouting ;-)
  
  • src/hg/lib/gtexUi.c - lines changed 33, context: html, text, full: html, text
• Fix HTML syntax err.
  
  • src/hg/lib/gtexUi.c - lines changed 4, context: html, text, full: html, text
• Minor style changes.
  
  • src/hg/lib/gtexUi.c - lines changed 3, context: html, text, full: html, text
• Persist ordering in tissue table (using sortOrder cart var)
  
  • src/hg/js/utils.js - lines changed 12, context: html, text, full: html, text
  • src/hg/lib/gtexUi.c - lines changed 22, context: html, text, full: html, text
• Cleanup styling.
  
  • src/hg/lib/gtexUi.c - lines changed 22, context: html, text, full: html, text
• Remove rainbow color scheme option. It would require noticeable work to implement fully (e.g. for tissue filter on trackUi and boxplot on hgc) and doesn't have an immediate use case. Leaving in the code as I can see there could be a need for alternate color schemes (e.g. distinct colors for brain). refs #15645
  
  • src/hg/hgTracks/gtexTracks.c - lines changed 4, context: html, text, full: html, text
  • src/hg/lib/gtexUi.c - lines changed 2, context: html, text, full: html, text
• Trimming long label a bit
  
  • src/hg/makeDb/trackDb/human/trackDb.gtex.ra - lines changed 1, context: html, text, full: html, text
• Special handling of popup configuration for GTEx track (see RM #15873 for why). refs #155645
  
  • src/hg/lib/gtexUi.c - lines changed 106, context: html, text, full: html, text
• Merge branch 'gtexUi'
  
• Cosmetics on GTEx Gene trackUI page, with special effort to fit tissue table in popup dialog without scrolling.
  
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 3, context: html, text, full: html, text
  • src/hg/js/hgTracks.js - lines changed 2, context: html, text, full: html, text
  • src/hg/lib/gtexUi.c - lines changed 28, context: html, text, full: html, text
• Use gene name in GTEx geme right-click menus, even when moused over a tissue. refs #15645
  
  • src/hg/js/hgTracks.js - lines changed 8, context: html, text, full: html, text
• Add apply button to UI popup dialog
  
  • src/hg/js/hgTracks.js - lines changed 10, context: html, text, full: html, text
• Tweak font size of title
  
  • src/hg/hgTrackUi/hgTrackUi.c - lines changed 1, context: html, text, full: html, text
• Fixes to Apply button on hgTrackUi popup. Cosmetics on GTEx UI.
  
  • src/hg/js/hgTracks.js - lines changed 5, context: html, text, full: html, text
  • src/hg/lib/gtexUi.c - lines changed 26, context: html, text, full: html, text
• Fix broken parsing of Safari version, so image update (e.g. for drag-zoom) can be used when version supports it.
  
  • src/hg/js/hgTracks.js - lines changed 9, context: html, text, full: html, text
• Merge branch 'master' into applyButtonBottom
  
  • src/hg/js/hgTracks.js - lines changed 11, context: html, text, full: html, text
• Improvements to GTEx trackUI. Especially right-click menus and popup. refs #15645
  
  • src/hg/js/hgTracks.js - lines changed 9, context: html, text, full: html, text
• Restore extTools default popup width. Tweak others a little.
  
  • src/hg/js/hgTracks.js - lines changed 3, context: html, text, full: html, text