File Changes for ceisenhart

v327_base to v328_preview (2016-01-11 to 2016-01-18) v328

• src/hg/cirm/cdw/wrangle/addMetaDataToJson/addMetaDataToJson
  • lines changed 53, context: html, text, full: html, text
    Refactoring this code, it no longer touches the .html files, refs# 16216
    
• src/hg/cirm/cdw/wrangle/addMetaDataToJson/tests/makefile
  • lines changed 5, context: html, text, full: html, text
    Adding test cases for a program in the visualization pipeline. refs #16216
    
  • lines changed 1, context: html, text, full: html, text
    Test files for the addMetaDataToJson script, refs# 16182
    
• src/hg/cirm/cdw/wrangle/addMetaDataToJson/tests/meta.tab
  • lines changed 9, context: html, text, full: html, text
    Adding test cases for a program in the visualization pipeline. refs #16216
    
• src/hg/cirm/cdw/wrangle/addMetaDataToJson/tests/testClusters.html
  • lines changed 209, context: html, text, full: html, text
    Adding test cases for a program in the visualization pipeline. refs #16216
    
  • lines changed 217, context: html, text, full: html, text
    Test files for the addMetaDataToJson script, refs# 16182
    
• src/hg/cirm/cdw/wrangle/addMetaDataToJson/tests/testClusters.json
  • lines changed 36, context: html, text, full: html, text
    Adding test cases for a program in the visualization pipeline. refs #16216
    
  • lines changed 15, context: html, text, full: html, text
    Test files for the addMetaDataToJson script, refs# 16182
    
• src/hg/expMatrixToJson/expMatrixToJson.c
  • lines changed 255, context: html, text, full: html, text
    fixing up the javascript that is printed, added some options to the visualization. refs #16216
    
  • lines changed 245, context: html, text, full: html, text
    Heavy refactoring to the .html output, now all javascript is in the file d3.dendrograms.js, refs# 16216
    
• src/hg/expMatrixToJson/tests/makefile
  • lines changed 3, context: html, text, full: html, text
    Added a makefile and testing conditions for the matrix to visualization. Also a file to explain the expected cluster values. refs #16216
    
  • lines changed 8, context: html, text, full: html, text
    Added some makefile options to make testing easier, refs #16216
    
• src/hg/expMatrixToJson/tests/matrix.mx
  • lines changed 2, context: html, text, full: html, text
    Added a makefile and testing conditions for the matrix to visualization. Also a file to explain the expected cluster values. refs #16216
    
• src/hg/expMatrixToJson/tests/matrixResults.txt
  • lines changed 7, context: html, text, full: html, text
    Added a makefile and testing conditions for the matrix to visualization. Also a file to explain the expected cluster values. refs #16216
    
• src/hg/js/d3.dendrograms.js
  • lines changed 578, context: html, text, full: html, text
    The new home for the visuzlization javascript code, refs# 16468, 16216,16341