Commits for hiram
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v381_base to v382_preview (2019-04-29 to 2019-05-06) v382
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527d5b5e1e77777e67a1f69d19e615e850258570 Tue Apr 30 09:46:00 2019 -0700
- fixup wiggle output itemCount refs #18869
- src/hg/hubApi/getData.c - lines changed 13, context: html, text, full: html, text
- src/hg/hubApi/tests/expected/wig01.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig02.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig03.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig04.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig05.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig06.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig07.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig08.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig09.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig10.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig11.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig12.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig13.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig14.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig15.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig16.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig17.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig18.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig19.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig20.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig21.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig22.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig23.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/wig24.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 179, context: html, text, full: html, text
aafa5935720a50d8e9c9c1ce88c2e7e93c4642ab Tue Apr 30 10:16:36 2019 -0700
- tests moved to other categories refs #18869
- src/hg/hubApi/tests/expected/test17.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test18.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test41.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test42.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
3df39731a0de10c2a708ce19d3022bb66b890085 Tue Apr 30 10:19:01 2019 -0700
- moved test41 test42 to other category refs #18869
- src/hg/hubApi/tests/makefile - lines changed 1, context: html, text, full: html, text
42d60420cb2b703a3cfe2134d6d7cf77f32cee8c Tue Apr 30 10:46:41 2019 -0700
- missing argument on apiErrAbort call, it results in a sigsegv refs #18869
- src/hg/hubApi/getData.c - lines changed 1, context: html, text, full: html, text
b59e6fc00f9ce106f08d9bada4b9e95b67843aa3 Tue Apr 30 10:58:59 2019 -0700
- testing non supported track types refs #18869
- src/hg/hubApi/tests/expected/notSup01.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/notSup02.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 25, context: html, text, full: html, text
e28cc42abe8dbb30decf688ad7be6d593fcc8b75 Tue Apr 30 15:56:20 2019 -0700
- adding extraneous argument checks for all functions to cause error refs #18869
- src/hg/hubApi/apiUtils.c - lines changed 54, context: html, text, full: html, text
- src/hg/hubApi/dataApi.h - lines changed 6, context: html, text, full: html, text
- src/hg/hubApi/getData.c - lines changed 8, context: html, text, full: html, text
- src/hg/hubApi/tests/expected/err24.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test31.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 1, context: html, text, full: html, text
9347e8dbe261da242e07497d64570bfe142b5930 Tue Apr 30 18:24:54 2019 -0700
- do not allow arbitrary garbage to get in via PATH_INFO refs #18869
060985eeea466cb4321e1e5e8c6401b62290f3ca Wed May 1 13:15:03 2019 -0700
- correctly finding table for list chromosome function with database table refs #18869
b1a610b0bcf08c2ed4688253801d8039b64380f2 Wed May 1 14:17:16 2019 -0700
- only allow positon tables on list chromosomes when table requested refs #18869
183a7505b5251fb0bdc4a6fca6d6420ed6a8d4b7 Wed May 1 14:46:21 2019 -0700
- add hg.conf variable to turn on the html output on the URL /cgi-bin/hubApi refs #18869
- src/hg/hubApi/hubApi.c - lines changed 20, context: html, text, full: html, text
6125c59026d71350da69c9e00bfabd43016b791a Wed May 1 14:47:00 2019 -0700
- add hg.conf variable to turn on the html output on the URL /cgi-bin/hubApi refs #18869
- src/hg/hubApi/dataApi.h - lines changed 2, context: html, text, full: html, text
a05ae5a901ce49be3ae8d4beb40308c65a16ef85 Wed May 1 15:28:51 2019 -0700
- correctly supply a Location header in the redirect refs #18869
37f6df9b99275b791d284eeac8d641e0cf2f9b41 Wed May 1 15:36:44 2019 -0700
- clean up HTML via W3C validator refs #18869
- src/hg/htdocs/goldenPath/help/api.html - lines changed 20, context: html, text, full: html, text
2d0e3b500f8e1d5f1ecf372797f942204fa729b8 Thu May 2 10:08:25 2019 -0700
- correctly manage list chromosomes function with various table types refs #18869
- src/hg/hubApi/tests/expected/list01.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list02.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list03.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list04.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list05.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list06.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list07.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list08.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list09.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list10.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list11.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list12.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list13.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list14.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/list15.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test31.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 105, context: html, text, full: html, text
811d634fc8b02a1f9156a002262a2763544682e5 Thu May 2 10:11:46 2019 -0700
- tests moved into list function test names refs #18869
- src/hg/hubApi/tests/expected/test1.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test2.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test22.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test23.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test3.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test30.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test31.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test4.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/test5.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
84b4398cfba70b1faf3ecff87404f0884aef4be6 Thu May 2 10:27:48 2019 -0700
- correcting err21 test refs #18869
- src/hg/hubApi/tests/expected/err21.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 6, context: html, text, full: html, text
722e3f4e77c812ebb31bb1533a4918f0cab8fee4 Thu May 2 11:37:03 2019 -0700
- adding tests to check for extraneous arguments refs #18869
- src/hg/hubApi/tests/expected/err15.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err30.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err31.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err32.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err33.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err34.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err35.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err36.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/jsonConsumer.pl - lines changed 33, context: html, text, full: html, text
- src/hg/hubApi/tests/makefile - lines changed 46, context: html, text, full: html, text
3ce41962a262ede824372d486cf8da609f3d3ae3 Thu May 2 14:22:43 2019 -0700
- checking for multiple instances of arguments and illegal strings on jsonOutputArrays and trackLeavesOnly refs #18869
- src/hg/hubApi/hubApi.c - lines changed 33, context: html, text, full: html, text
1b5d4cf1c155cb8afbbf5f635e16c8b396be5de6 Thu May 2 14:31:02 2019 -0700
- fixing err35 and err36 outputs refs #18869
- src/hg/hubApi/tests/expected/err35.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err36.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/makefile - lines changed 2, context: html, text, full: html, text
6d310e4d8a6999ac3d20a1d44b114ae7591bfef6 Thu May 2 15:06:14 2019 -0700
- add tests for illegal values to arguments and duplicated argument refs #18869
- src/hg/hubApi/tests/expected/err37.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
- src/hg/hubApi/tests/expected/err38.gz - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
af07465d52b25936c5c185d8fbe68b0e8c7a5bfd Mon May 6 09:58:34 2019 -0700
- v382 preview1, refs #23326
- src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text
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