File Changes for angie

v390_base to v391_preview (2019-11-04 to 2019-11-11) v391

• src/hg/js/ddcl.js
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    1dc4c848cde9fc9d738fc07841fd4e83e6df20a4 Mon Nov 4 11:38:07 2019 -0800
    Adding triangle icon to all drop-down checklists with class=filterBy. Thx Ana. refs #23283
• src/hg/makeDb/doc/bigDbSnp.txt
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    356c96fb811f1c8649d7685de33011877268d062 Tue Nov 5 10:35:31 2019 -0800
    dbSnp153: rebuild to get correct counts of diffMajor and refIsMinor. refs #23283
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    f0872f4adaa41af355cf492134407abc595e3830 Thu Nov 7 14:55:11 2019 -0800
    Rebuild bigDbSnp153 after fixing VCF allele normalization in dbSnpJsonToTab. refs #23283
• src/hg/makeDb/trackDb/human/dbSnp153Composite.html
  • lines changed 4, context: html, text, full: html, text
    356c96fb811f1c8649d7685de33011877268d062 Tue Nov 5 10:35:31 2019 -0800
    dbSnp153: rebuild to get correct counts of diffMajor and refIsMinor. refs #23283
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    76dc0f3ea238bf75a5b62153f225e04bd4e29f3c Tue Nov 5 12:07:48 2019 -0800
    label/description tweaks suggested by Lou. refs #23283
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    b0132bc5984bafde279db01449f27699aefde0a3 Thu Nov 7 14:51:58 2019 -0800
    Reworded revStrand description, thx Lou. refs #23283
• src/hg/makeDb/trackDb/human/trackDb.ra
  • lines changed 1, context: html, text, full: html, text
    76dc0f3ea238bf75a5b62153f225e04bd4e29f3c Tue Nov 5 12:07:48 2019 -0800
    label/description tweaks suggested by Lou. refs #23283
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    1eb62c61ee677b7a3c90cc77465dcbeacec479ce Tue Nov 5 13:30:58 2019 -0800
    Oops, forgot to add some values to ucscNotesFilterValues. refs #23283
• src/hg/snp/dbSnpJsonToTab/dbSnpJsonToTab.c
  • lines changed 16, context: html, text, full: html, text
    aba80d9c6d410fb7d9caf9a4b58fe1aefe2fe6bb Tue Nov 5 14:41:46 2019 -0800
    If alleles from VCF have not been minimalized but can't be expanded either, use the minimal version to get rid of extra left base. refs #23283
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    4eee2fe1d4677db4a6c43ab43fbff6ea72acd318 Wed Nov 6 15:03:00 2019 -0800
    Need to consider all alleles together when trimming extra bases from freq alleles. refs #23283