Commits for chmalee

v397_base to v398_preview (2020-04-20 to 2020-04-27) v398

a85f07414441c0ad4d8310620fe5c40a33f2f5fd Tue Apr 21 11:12:07 2020 -0700

• Changing lovd and clinvar otto scripts, structural variant cutoff is now >= 50bp, which brings gnomad, dbVar, clinvar, and lovd into harmony
  • src/hg/utils/otto/clinvar/clinVarToBed - lines changed 3, context: html, text, full: html, text
  • src/hg/utils/otto/lovd/checkAndLoad.sh - lines changed 2, context: html, text, full: html, text

808cdc046593cff1a4b4d2db2762a4ef4b996dca Tue Apr 21 12:49:51 2020 -0700

• Changing track descriptions and labels of clinvar and lovd tracks to reflect changes to length cutoff for the cnv and short variants
  • src/hg/makeDb/trackDb/human/clinvar.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/lovdComp.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.clinvar.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.clinvarTest.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 2, context: html, text, full: html, text