File Changes for max

v398_preview to v398_preview2 (2020-04-27 to 2020-05-04) v398

• src/hg/hgTracks/bigBedTrack.c
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    ba6e961593b24def506fa73e55d31542fb780a88 Mon Apr 27 12:35:33 2020 -0700
    Revert "adding multipleListOnlyAnd and multipleListOnlyOr to bigBed handling code. refs #25136" This reverts commit 86b389767dc3185b8fd02cbe21276d65df7f1667.
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    e8969bff1017d3fc8ca3e45be2040d79d41bc2a0 Wed Apr 29 06:52:05 2020 -0700
    Revert "Revert "adding multipleListOnlyAnd and multipleListOnlyOr to bigBed handling code. refs #25136"" This reverts commit ba6e961593b24def506fa73e55d31542fb780a88.
• src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html
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    e4c2fec30dc9d455d711e69eda81105a7c9fd7cc Wed Apr 29 07:28:44 2020 -0700
    fixing doc typo found by Kate, no redmine
• src/hg/htdocs/style/HGStyle.css
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    0811c1da172a367fe55928a4869f77978ff83fdb Wed Apr 29 06:53:36 2020 -0700
    making bigbed extra filters a bit easier to see, refs #24850
• src/hg/inc/bigBedFilter.h
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    a9759376f1c3dee161fe74a7e4c35aba756a4f50 Wed Apr 29 06:52:47 2020 -0700
    adding multiple list only defines, refs #25136""
• src/hg/lib/genbankBed12.as
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    808fa9a4c306d2d85df51d5c7c8ea9976a0fb0f1 Thu Apr 30 11:41:48 2020 -0700
    adding genbankToBigGenePred tool, right now only for wuhCor1 assembly, but possibly useful elsewhere, as per emails with Braney
• src/hg/lib/genbankBigGenePred.as
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    808fa9a4c306d2d85df51d5c7c8ea9976a0fb0f1 Thu Apr 30 11:41:48 2020 -0700
    adding genbankToBigGenePred tool, right now only for wuhCor1 assembly, but possibly useful elsewhere, as per emails with Braney
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    dbcc7835da6ae05a32f309ba3f9ec6c52b966e55 Sat May 2 08:27:10 2020 -0700
    fixing duplicate table name, nightly auto email.
• src/hg/makeDb/trackDb/targets.html
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    207229f284b91ec0bd2eaa856fe639d7786fe8e9 Mon Apr 27 12:26:51 2020 -0700
    adding T cell epitopes track, refs #25458
• src/hg/makeDb/trackDb/virus/wuhCor1/crisprDet.html
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    d4e4fb0192774a89920712be10bdb90b0e3c7352 Wed Apr 29 05:43:56 2020 -0700
    fixing crisprDet docs page, refs #25247
• src/hg/makeDb/trackDb/virus/wuhCor1/gordon.html
  • lines changed 33, context: html, text, full: html, text
    19ef0bf76151acd7bf6a2ef7cf30d683dbda30d1 Wed Apr 29 05:42:55 2020 -0700
    fixing gordon docs page, refs #25247
• src/hg/makeDb/trackDb/virus/wuhCor1/gordon2.html
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    19ef0bf76151acd7bf6a2ef7cf30d683dbda30d1 Wed Apr 29 05:42:55 2020 -0700
    fixing gordon docs page, refs #25247
• src/hg/makeDb/trackDb/virus/wuhCor1/kim2020.ra
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    b37b09c21ea36d8e14179f0619ba4306e518f4e0 Tue Apr 28 07:55:21 2020 -0700
    adding wuhCor1 transcriptome track, refs #25468
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    c2232f0fb90e36e169de6f6acddbf6404bf2e1b0 Tue Apr 28 09:15:33 2020 -0700
    renaming transcript subtracks so the long label makes more sense, refs #25468
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    cf7597bcca30b45f90c5ff4cd7a8f2227bf123d7 Wed Apr 29 05:45:26 2020 -0700
    hiding the kim 2020 transcriptome track', refs #25468
• src/hg/makeDb/trackDb/virus/wuhCor1/rfam.html
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    be446d716d5a6e9026b13d9302ca63d662a50af2 Mon Apr 27 15:09:58 2020 -0700
    adding rfam track, ref #25463
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    13f5190912cd31652cb88eba31f365ee1d13304b Mon Apr 27 15:11:39 2020 -0700
    fixing unicode problem on rfam docs page, refs #25463
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.nextstrain.ra
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    ec2b3412815fe8a90c4f4fc2a20ceb38f407c22a Fri May 1 16:59:57 2020 -0700
    adding nextstrain counts, refs #25481
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra
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    cac2a1c8f8b04d51a51c4f561c82fbb6c0cd5725 Mon Apr 27 12:04:27 2020 -0700
    changing user annots label, refs #25297
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    7570f83b5d7ca8ca334df52f84bbd64300237317 Mon Apr 27 12:07:52 2020 -0700
    fixing merge conflict
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    207229f284b91ec0bd2eaa856fe639d7786fe8e9 Mon Apr 27 12:26:51 2020 -0700
    adding T cell epitopes track, refs #25458
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    be446d716d5a6e9026b13d9302ca63d662a50af2 Mon Apr 27 15:09:58 2020 -0700
    adding rfam track, ref #25463
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    c2232f0fb90e36e169de6f6acddbf6404bf2e1b0 Tue Apr 28 09:15:33 2020 -0700
    renaming transcript subtracks so the long label makes more sense, refs #25468
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    a21934e112439626fa6dd349ec8ec40b04738565 Wed Apr 29 06:49:38 2020 -0700
    moving crisprDet to map and seq group, refs #25247
• src/hg/makeDb/trackDb/virus/wuhCor1/transcriptome.html
  • lines changed 56, context: html, text, full: html, text
    b37b09c21ea36d8e14179f0619ba4306e518f4e0 Tue Apr 28 07:55:21 2020 -0700
    adding wuhCor1 transcriptome track, refs #25468
• src/utils/genbankToBigGenePred
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    808fa9a4c306d2d85df51d5c7c8ea9976a0fb0f1 Thu Apr 30 11:41:48 2020 -0700
    adding genbankToBigGenePred tool, right now only for wuhCor1 assembly, but possibly useful elsewhere, as per emails with Braney