File Changes for braney

v399_preview2 to v399_base (2020-05-25 to 2020-06-01) v399

• src/hg/inc/versionInfo.h
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    b07650d95d9277aced9e2027203659b0729a1060 Mon Jun 1 10:03:46 2020 -0700
    New version number v399
• src/hg/lib/annoGratorGpVar.c
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    d93f47cd567bb70aba94de233054e8b4fae00f7d Fri May 29 15:33:58 2020 -0700
    remove frameshifts from psls in hgVai
• src/hg/lib/variantProjector.c
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    e4b95e1845f752954f388a0c61b7d4a107baa80a Wed May 27 18:02:07 2020 -0700
    don't count frameshifts as small introns
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    a8a289ed81fa32737a91d784a3ebcc1c886770e7 Fri May 29 11:31:31 2020 -0700
    Revert "don't count frameshifts as small introns" This reverts commit e4b95e1845f752954f388a0c61b7d4a107baa80a.
• src/inc/psl.h
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    d93f47cd567bb70aba94de233054e8b4fae00f7d Fri May 29 15:33:58 2020 -0700
    remove frameshifts from psls in hgVai
• src/inc/srcVersion.h
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    b07650d95d9277aced9e2027203659b0729a1060 Mon Jun 1 10:03:46 2020 -0700
    New version number v399
• src/lib/psl.c
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    d93f47cd567bb70aba94de233054e8b4fae00f7d Fri May 29 15:33:58 2020 -0700
    remove frameshifts from psls in hgVai
• src/utils/makefile
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    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/makefile
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    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/pslRemoveFrameShifts.c
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    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/tests/expected/negative.psl
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    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/tests/expected/positive.psl
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    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/tests/input/negative.psl
  • lines changed 1, context: html, text, full: html, text
    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/tests/input/positive.psl
  • lines changed 1, context: html, text, full: html, text
    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/pslRemoveFrameShifts/tests/makefile
  • lines changed 22, context: html, text, full: html, text
    7455616a47bc45dbaf93df347345abe1747390c1 Sat May 30 09:10:32 2020 -0700
    add tests for pslRemoveFrameShifts
• src/utils/qa/weeklybld/buildEnv.csh
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    3c575ff9551ac6cb939a4ee7f9516d41e0a9c4d0 Mon Jun 1 10:02:00 2020 -0700
    v399 final build