File Changes for kate

v398_base to v399_preview (2020-05-11 to 2020-05-18) v399

• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 102, context: html, text, full: html, text
    9599e99e622644fc958a1a6481b82778cfd9a27f Thu Feb 13 14:12:01 2020 -0800
    Initial cut adding supertrack info to member track UI. refs #24948
  • lines changed 37, context: html, text, full: html, text
    8149e01f1abf2d532e4bc0cd516713a536640006 Wed Feb 19 12:08:24 2020 -0800
    Tweak to match Ana's mock-up. Still in progress. refs #24948
  • lines changed 36, context: html, text, full: html, text
    2ed451a171f3939be436ccc3bf6f0800f9df2a3a Fri Feb 21 17:41:17 2020 -0800
    Implement collapsible panel with supertrack description, to appear at top of supertrack component track config page. refs #24948
  • lines changed 4, context: html, text, full: html, text
    bb2ae39fd12b2df4ec06b435e63f69da6097e21e Tue May 5 14:38:24 2020 -0700
    Add link to super-track HTML from supertrack member description collapsible panel. By request of Lou. refs #24668
  • lines changed 17, context: html, text, full: html, text
    b9d7723866095088387017765ea962f83e87bbfd Wed May 6 16:23:13 2020 -0700
    Add supertrack to supertrack member title bar. Part of attempt to make supertrack member UI page easier to understand (show hierarchy but subtly). refs #24948
  • lines changed 1, context: html, text, full: html, text
    9a54ece0b8406d393f065c03a0531d711ad6e5f3 Wed May 6 16:33:52 2020 -0700
    Take 2 on removing 'super-track' from supertrack blue bar. Off-shoot of discussion on better supertrack member track UI pages. refs #24948
  • lines changed 59, context: html, text, full: html, text
    1e695a4eb7c3df8d90db67d0859efb86fde53201 Wed May 6 17:51:49 2020 -0700
    Add collapsed panel with other tracks in supertrackand remove intro verbiage. Overall slim down the top material indicating hierarchy. Based on UI input from Ana and MarkD. refs #24948
  • lines changed 4, context: html, text, full: html, text
    4ad18f5e3c3e5b960a138161d8048cd7d3a2f34d Wed May 6 18:01:29 2020 -0700
    Fix styling. refs #24948
  • lines changed 121, context: html, text, full: html, text
    7597f413c7812055e03a9dd5177432be2a827571 Thu May 7 08:59:01 2020 -0700
    Remove second section, moving supertrack info into main section to simplify page. Expecting this to be final design (has hadded extensive UI review). refs #24948
  • lines changed 6, context: html, text, full: html, text
    60fb3562b8ca97c4e215049c9092e01eb6ce70cc Mon May 11 16:19:31 2020 -0700
    Switch back to listing all tracks in super (not 'other'). Request of MarkD. refs #24948
  • lines changed 2, context: html, text, full: html, text
    363ca5c576b616861e58d410da17f24cc562db96 Mon May 11 16:56:59 2020 -0700
    Use existing backdoor to allow HTML tags for styling in trackUi title bar. Request of MarkD to include parent short label in supertrack member title (show hierarchy), prompted motivation to expand styling. refs #24948
  • lines changed 23, context: html, text, full: html, text
    877b1886b6e9ee73fa26477cbf83bbf16771bb3d Wed May 13 16:24:46 2020 -0700
    Restore ENCODE logo to track header (not supertrack). Remove uplink to all tracks in group from the supertrack link. Maybe we decided to remove this generally ?. refs #24948
• src/hg/htdocs/covid19.html
  • lines changed 4, context: html, text, full: html, text
    1e4593e163722bd3878db5d83392b57525ec9ca2 Mon May 11 12:45:42 2020 -0700
    Update Nextstrain transmission graphic on COVID-19 page. refs #25217
  • lines changed 8, context: html, text, full: html, text
    85154a6ca6d1acae41c3dc7ac97d6f58d23496cb Mon May 11 12:58:36 2020 -0700
    Add info about our bioRxiv paper. refs #25217
• src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml
  • lines changed 10, context: html, text, full: html, text
    79142546956ba8b0d94175b6e0adcb0c5c01172d Wed May 13 16:56:19 2020 -0700
    Fixes to doc for hideEmptySubtracks settings, refs #23365
• src/hg/htdocs/images/covid19-transmission.may8_2020.nextstrain.png
  • lines changed 0, context: html, text, full: html, text
    1e4593e163722bd3878db5d83392b57525ec9ca2 Mon May 11 12:45:42 2020 -0700
    Update Nextstrain transmission graphic on COVID-19 page. refs #25217
• src/hg/lib/web.c
  • lines changed 3, context: html, text, full: html, text
    b9d7723866095088387017765ea962f83e87bbfd Wed May 6 16:23:13 2020 -0700
    Add supertrack to supertrack member title bar. Part of attempt to make supertrack member UI page easier to understand (show hierarchy but subtly). refs #24948
  • lines changed 1, context: html, text, full: html, text
    306429a79f9eedb8614ad52c6f5e2ad60bc50449 Mon May 11 16:54:58 2020 -0700
    Reverting html and web lib changes for allowing tags in title bars. (For now, limiting to trackUi). refs #24948
• src/hg/makeDb/trackDb/encodeCcreCombined.html
  • lines changed 151, context: html, text, full: html, text
    2c78d69bf51c0282d97dd262b8f9005f1c5d3192 Tue May 12 16:32:36 2020 -0700
    Polish track config and draft track description. refs #24668
  • lines changed 23, context: html, text, full: html, text
    c1bf92e8d0500957bef941593240f66eabe8094d Wed May 13 10:30:24 2020 -0700
    Polish track description and generalize to include mouse. Add 4-char labels for classification and abbreviated accession label as per JK. Filter on the more user-friendly classification labels. refs #24668
• src/hg/makeDb/trackDb/trackDb.encode3.ra
  • lines changed 9, context: html, text, full: html, text
    2c78d69bf51c0282d97dd262b8f9005f1c5d3192 Tue May 12 16:32:36 2020 -0700
    Polish track config and draft track description. refs #24668
  • lines changed 2, context: html, text, full: html, text
    c1bf92e8d0500957bef941593240f66eabe8094d Wed May 13 10:30:24 2020 -0700
    Polish track description and generalize to include mouse. Add 4-char labels for classification and abbreviated accession label as per JK. Filter on the more user-friendly classification labels. refs #24668
• src/inc/htmshell.h
  • lines changed 3, context: html, text, full: html, text
    b9d7723866095088387017765ea962f83e87bbfd Wed May 6 16:23:13 2020 -0700
    Add supertrack to supertrack member title bar. Part of attempt to make supertrack member UI page easier to understand (show hierarchy but subtly). refs #24948
  • lines changed 3, context: html, text, full: html, text
    306429a79f9eedb8614ad52c6f5e2ad60bc50449 Mon May 11 16:54:58 2020 -0700
    Reverting html and web lib changes for allowing tags in title bars. (For now, limiting to trackUi). refs #24948
• src/lib/htmshell.c
  • lines changed 8, context: html, text, full: html, text
    b9d7723866095088387017765ea962f83e87bbfd Wed May 6 16:23:13 2020 -0700
    Add supertrack to supertrack member title bar. Part of attempt to make supertrack member UI page easier to understand (show hierarchy but subtly). refs #24948
  • lines changed 8, context: html, text, full: html, text
    306429a79f9eedb8614ad52c6f5e2ad60bc50449 Mon May 11 16:54:58 2020 -0700
    Reverting html and web lib changes for allowing tags in title bars. (For now, limiting to trackUi). refs #24948