Commits for markd

v400_preview to v400_preview2 (2020-06-08 to 2020-06-15) v400

938e268e16bbcd34a1c98b98919df7d9869f588b Fri Jun 5 18:57:32 2020 -0700

• imported GENCODE V35 pre-release
  • src/hg/makeDb/doc/hg38/gencode.txt - lines changed 34, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 96, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeSuper.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV35.html - lines changed 47, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/wgEncodeGencodeV35.ra - lines changed 286, context: html, text, full: html, text

fcdf5c401c80840d28c346409c4fbb527544fac7 Tue Jun 9 13:59:33 2020 -0700

• make gencode hgc robust against metadata that is sometimes not mapped in the backmap releases
  • src/hg/hgc/gencodeClick.c - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg19.gencode.txt - lines changed 29, context: html, text, full: html, text
  • src/hg/makeDb/outside/gencode/gencodeLoad.mk - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/schema/all.joiner - lines changed 92, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gencode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV35lift37.html - lines changed 32, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV35lift37.ra - lines changed 224, context: html, text, full: html, text

2ffab4396193a716178dbf8b75c36633607d0bcb Sun Jun 14 14:38:26 2020 -0700

• fixed typo in header
  • src/hg/pslStats/pslStats.c - lines changed 9, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/cdna2cdnaOverallTest.stats - lines changed 1, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/cdna2cdnaQueryTest.stats - lines changed 1, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/untransOverallTest.stats - lines changed 1, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/untransOverallUnalnTest.stats - lines changed 1, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/untransQueryTest.stats - lines changed 1, context: html, text, full: html, text
  • src/hg/pslStats/tests/expected/untransQueryUnalnTest.stats - lines changed 1, context: html, text, full: html, text