Commits for braney

v403_preview2 to v403_base (2020-08-17 to 2020-08-24) v403

8c5ceb895b3852e45c5396169285247b7d2792ac Tue Aug 18 15:38:36 2020 -0700

• open the correct gene track when using hgSuggest with assembliees without knownGene
  • src/hg/lib/suggest.c - lines changed 6, context: html, text, full: html, text

fb00da5974d75ff6cb2ebbce5ad7f2a072a5ec8d Thu Aug 20 09:18:01 2020 -0700

• remove dependency on hgNearData, which is release controlled
  • src/hg/near/hgNear/hgNear.c - lines changed 5, context: html, text, full: html, text

768289e6cf447f433a89c75856d60a3b018b53aa Thu Aug 20 11:00:29 2020 -0700

• add trackDb variables to allow the composite parent to forego the settings of the first track, and to show the configuration of a subtrack by default
  • src/hg/lib/hui.c - lines changed 22, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.clinvarTest.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text

0b81078213eff40174d357fbc8632ed7077baec4 Fri Aug 21 09:47:38 2020 -0700

• changes to support the lack of native knownGene tables in an assembly.
  • src/hg/hgGene/hgGene.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/links.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/hgGene/hgGeneData/otherOrgs.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/hgGene/links.c - lines changed 1, context: html, text, full: html, text
  • src/hg/hgGene/otherOrgs.c - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/doc/ucscGenes/hg38.gencodeV35.sh - lines changed 1, context: html, text, full: html, text

0a825d5861f162d34ceae24e8c5f09863c9aea16 Sat Aug 22 06:22:16 2020 -0700

• fix up hgNearTest to know about separate knownGene databases
  • src/hg/lib/hdb.c - lines changed 5, context: html, text, full: html, text
  • src/hg/near/hgNearTest/hgNearTest.c - lines changed 2, context: html, text, full: html, text

3cbfdeebb6d99b98e910f31cda4ac0bd0e33c410 Mon Aug 24 10:05:44 2020 -0700

• v403 final build
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text

5f7f06147265d248e99118adb21d85b08a882b1a Mon Aug 24 10:06:48 2020 -0700

• New version number v403
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text
  • src/inc/srcVersion.h - lines changed 1, context: html, text, full: html, text