Commits for hiram

v403_preview2 to v403_base (2020-08-17 to 2020-08-24) v403

9d0b167a9ea9f20e7d06fb51e4688672eb583f9d Mon Aug 17 12:19:47 2020 -0700

• Added ambMex2; refs #23367
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 24, context: html, text, full: html, text

f5e6b5d6bdf224b0dac7a6982e10e029215196b4 Mon Aug 17 12:21:08 2020 -0700

• Added ambMex2 refs #23367
  • src/hg/makeDb/genbank/etc/align.dbs - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/etc/hgwdev.dbs - lines changed 2, context: html, text, full: html, text

180fdd5b8ed0b1d93cde304e58816ee64eb9f7f0 Mon Aug 17 12:22:20 2020 -0700

• have 2bit masked with custom repeat library refs #23367
  • src/hg/makeDb/doc/ambMex2/initialBuild.txt - lines changed 198, context: html, text, full: html, text

0fee4835763cc67799a462b1d0c90d66a40f2f02 Mon Aug 17 12:45:51 2020 -0700

• lastz chainNet mm10 to canFam5 in progress refs #25917
  • src/hg/makeDb/doc/mm10.txt - lines changed 6, context: html, text, full: html, text

5dbad70c3a1445cc3a505b451c623f9aa7bcca3b Mon Aug 17 12:46:26 2020 -0700

• lastz chainNet hg38 to canFam5 in progress refs #25917
  • src/hg/makeDb/doc/hg38/lastzRuns.txt - lines changed 76, context: html, text, full: html, text

5ea80cd83327f973e24ee93695b321a77fd8bbd9 Mon Aug 17 12:49:16 2020 -0700

• starting lastz chainNet to canFam5 refs #25917
  • src/hg/makeDb/doc/mm39/lastzRuns.txt - lines changed 69, context: html, text, full: html, text

d083e4c81c2db4fcf9e2b250bdd779ef55a3a3ba Mon Aug 17 13:15:24 2020 -0700

• starting lastz chainNet for mm39 refs #22271
  • src/hg/makeDb/doc/hg38/lastzRuns.txt - lines changed 73, context: html, text, full: html, text

a8c34aed0a71d4674178d116c7a8ec99186377b2 Tue Aug 18 08:51:45 2020 -0700

• lastz chainNet to canFam5 complete refs #25917
  • src/hg/makeDb/doc/hg38/lastzRuns.txt - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/doc/mm10.txt - lines changed 10, context: html, text, full: html, text

102ab1cb5a7f8f8b1ed1197e69b204f340252501 Tue Aug 18 08:58:37 2020 -0700

• adding mm39 chainNet definition refs #22271
  • src/hg/makeDb/trackDb/trackDb.chainNet.euarchontoglires.ra - lines changed 54, context: html, text, full: html, text

fbf1a3a1fac7fdd4ad7bd169e966fe28c9a01f7f Tue Aug 18 09:08:22 2020 -0700

• adding canFam5 definitions refs #25917
  • src/hg/makeDb/trackDb/trackDb.chainNet.mammal.ra - lines changed 55, context: html, text, full: html, text